RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NCAPD2Q15021 1401 aa36.15■■■■□ 3.38
CCM2-211ENST00000478582 EYA1Q99502 592 aa36.14■■■■□ 3.38
CCM2-211ENST00000478582 IL13P35225 146 aa36.12■■■■□ 3.37
CCM2-211ENST00000478582 PLSCR1O15162 318 aa36.09■■■■□ 3.37
CCM2-211ENST00000478582 PTF1AQ7RTS3 328 aa36.09■■■■□ 3.37
CCM2-211ENST00000478582 USHBP1Q8N6Y0 703 aa36.09■■■■□ 3.37
CCM2-211ENST00000478582 IGSF1Q8N6C5 1336 aa36.08■■■■□ 3.37
CCM2-211ENST00000478582 COL3A1P02461 1466 aaPredicted RBP36.07■■■■□ 3.37
CCM2-211ENST00000478582 DIAPH1O60610 1272 aaKnown RBP36.06■■■■□ 3.36
CCM2-211ENST00000478582 CFAP53Q96M91 514 aa36.06■■■■□ 3.36
CCM2-211ENST00000478582 PRKRIP1Q9H875 184 aaPredicted RBP36.06■■■■□ 3.36
CCM2-211ENST00000478582 RREB1Q92766 1687 aa36.06■■■■□ 3.36
CCM2-211ENST00000478582 PSDA5PKW4 1024 aaPredicted RBP36.05■■■■□ 3.36
CCM2-211ENST00000478582 RAPGEF4Q8WZA2 1011 aa36.02■■■■□ 3.36
CCM2-211ENST00000478582 MEGF6O75095 1541 aa36.02■■■■□ 3.36
CCM2-211ENST00000478582 DDX54Q8TDD1 881 aaKnown RBP36.01■■■■□ 3.36
CCM2-211ENST00000478582 RGPD3A6NKT7 1758 aaPredicted RBP36.01■■■■□ 3.35
CCM2-211ENST00000478582 RGPD4Q7Z3J3 1758 aa36.01■■■■□ 3.35
CCM2-211ENST00000478582 MYBBP1AQ9BQG0 1328 aaKnown RBP36.01■■■■□ 3.35
CCM2-211ENST00000478582 KCNQ2O43526 872 aa36■■■■□ 3.35
CCM2-211ENST00000478582 R3HDM1Q15032 1099 aaKnown RBP36■■■■□ 3.35
CCM2-211ENST00000478582 ZCRB1Q8TBF4 217 aaKnown RBP36■■■■□ 3.35
CCM2-211ENST00000478582 TATP17735 454 aaPredicted RBP35.99■■■■□ 3.35
CCM2-211ENST00000478582 ACSBG1Q96GR2 724 aa35.99■■■■□ 3.35
CCM2-211ENST00000478582 NUP188Q5SRE5 1749 aa35.99■■■■□ 3.35
CCM2-211ENST00000478582 NBPF14Q5TI25 921 aa35.98■■■■□ 3.35
CCM2-211ENST00000478582 PLEKHG2Q9H7P9 1386 aa35.97■■■■□ 3.35
CCM2-211ENST00000478582 NHSQ6T4R5 1651 aa35.97■■■■□ 3.35
CCM2-211ENST00000478582 KDRP35968 1356 aa35.96■■■■□ 3.35
CCM2-211ENST00000478582 KAT6BQ8WYB5 2073 aa35.95■■■■□ 3.34
CCM2-211ENST00000478582 SULT6B1Q6IMI4 303 aa35.93■■■■□ 3.34
CCM2-211ENST00000478582 PROM2Q8N271 834 aa35.92■■■■□ 3.34
CCM2-211ENST00000478582 AEBP1Q8IUX7 1158 aa35.91■■■■□ 3.34
CCM2-211ENST00000478582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.91■■■■□ 3.34
CCM2-211ENST00000478582 NUDCQ9Y266 331 aa35.91■■■■□ 3.34
CCM2-211ENST00000478582 SHANK3Q9BYB0 1731 aa35.9■■■■□ 3.34
CCM2-211ENST00000478582 TXNRD1Q16881 649 aa35.88■■■■□ 3.33
CCM2-211ENST00000478582 U2SURPO15042 1029 aaKnown RBP35.87■■■■□ 3.33
CCM2-211ENST00000478582 ANP32CO43423 234 aa35.87■■■■□ 3.33
CCM2-211ENST00000478582 SPG7Q9UQ90 795 aa35.85■■■■□ 3.33
CCM2-211ENST00000478582 PKD1L3Q7Z443 1732 aa35.85■■■■□ 3.33
CCM2-211ENST00000478582 HMOX1P09601 288 aa35.84■■■■□ 3.33
CCM2-211ENST00000478582 BTAF1O14981 1849 aa35.84■■■■□ 3.33
CCM2-211ENST00000478582 SRCAPQ6ZRS2 3230 aa35.84■■■■□ 3.33
CCM2-211ENST00000478582 PCDH11XQ9BZA7 1347 aa35.83■■■■□ 3.33
CCM2-211ENST00000478582 PCDH11YQ9BZA8 1340 aa35.83■■■■□ 3.33
CCM2-211ENST00000478582 PRIM1P49642 420 aaKnown RBP35.81■■■■□ 3.32
CCM2-211ENST00000478582 LRP5O75197 1615 aa35.81■■■■□ 3.32
CCM2-211ENST00000478582 AMOTQ4VCS5 1084 aa35.8■■■■□ 3.32
CCM2-211ENST00000478582 PLEKHO1Q53GL0 409 aaPredicted RBP35.8■■■■□ 3.32
CCM2-211ENST00000478582 CYP27B1O15528 508 aa35.78■■■■□ 3.32
CCM2-211ENST00000478582 U2AF1L5P0DN76 240 aaPredicted RBP35.78■■■■□ 3.32
CCM2-211ENST00000478582 U2AF1Q01081 240 aaKnown RBP eCLIP35.78■■■■□ 3.32
CCM2-211ENST00000478582 SYTL4Q96C24 671 aaPredicted RBP35.78■■■■□ 3.32
CCM2-211ENST00000478582 ANO8Q9HCE9 1232 aaPredicted RBP35.78■■■■□ 3.32
CCM2-211ENST00000478582 DOT1LQ8TEK3 1739 aa35.77■■■■□ 3.32
CCM2-211ENST00000478582 FCHSD2O94868 740 aa35.75■■■■□ 3.31
CCM2-211ENST00000478582 RSPH6AQ9H0K4 717 aa35.75■■■■□ 3.31
CCM2-211ENST00000478582 NKX1-1Q15270 411 aaPredicted RBP35.73■■■■□ 3.31
CCM2-211ENST00000478582 IFNL2Q8IZJ0 200 aa35.73■■■■□ 3.31
CCM2-211ENST00000478582 PHKG2P15735 406 aa35.71■■■■□ 3.31
CCM2-211ENST00000478582 STK32BQ9NY57 414 aa35.71■■■■□ 3.31
CCM2-211ENST00000478582 SLC15A2Q16348 729 aa35.69■■■■□ 3.3
CCM2-211ENST00000478582 PRKAR2BP31323 418 aa35.68■■■■□ 3.3
CCM2-211ENST00000478582 ZNF530Q6P9A1 599 aaPredicted RBP35.68■■■■□ 3.3
CCM2-211ENST00000478582 SLC27A3Q5K4L6 730 aa35.67■■■■□ 3.3
CCM2-211ENST00000478582 LRRC4BQ9NT99 713 aa35.67■■■■□ 3.3
CCM2-211ENST00000478582 HSP90AB1P08238 724 aaKnown RBP35.64■■■■□ 3.3
CCM2-211ENST00000478582 MTHFSDQ2M296 383 aaKnown RBP35.64■■■■□ 3.3
CCM2-211ENST00000478582 PNNQ9H307 717 aaKnown RBP35.63■■■■□ 3.29
CCM2-211ENST00000478582 C1orf141Q5JVX7 400 aa35.62■■■■□ 3.29
CCM2-211ENST00000478582 PHACTR3Q96KR7 559 aa35.62■■■■□ 3.29
CCM2-211ENST00000478582 PAPPAQ13219 1627 aa35.61■■■■□ 3.29
CCM2-211ENST00000478582 CCDC184Q52MB2 194 aa35.61■■■■□ 3.29
CCM2-211ENST00000478582 AKAP4Q5JQC9 854 aa35.61■■■■□ 3.29
CCM2-211ENST00000478582 WDR43Q15061 677 aaKnown RBP eCLIP35.6■■■■□ 3.29
CCM2-211ENST00000478582 GAS2L2Q8NHY3 880 aa35.6■■■■□ 3.29
CCM2-211ENST00000478582 DCAF5Q96JK2 942 aa35.6■■■■□ 3.29
CCM2-211ENST00000478582 PLEKHF1Q96S99 279 aa35.6■■■■□ 3.29
CCM2-211ENST00000478582 SPON1Q9HCB6 807 aa35.6■■■■□ 3.29
CCM2-211ENST00000478582 LY75O60449 1722 aa35.6■■■■□ 3.29
CCM2-211ENST00000478582 MPRIPQ6WCQ1 1025 aa35.59■■■■□ 3.29
CCM2-211ENST00000478582 CASZ1Q86V15 1759 aa35.59■■■■□ 3.29
CCM2-211ENST00000478582 PDGFDQ9GZP0 370 aaPredicted RBP35.58■■■■□ 3.29
CCM2-211ENST00000478582 ITGB4P16144 1822 aa35.57■■■■□ 3.28
CCM2-211ENST00000478582 TOGARAM1Q9Y4F4 1720 aa35.57■■■■□ 3.28
CCM2-211ENST00000478582 DIEXFQ68CQ4 756 aaKnown RBP35.55■■■■□ 3.28
CCM2-211ENST00000478582 ADAMTS8Q9UP79 889 aa35.55■■■■□ 3.28
CCM2-211ENST00000478582 NEFMP07197 916 aa35.54■■■■□ 3.28
CCM2-211ENST00000478582 KCNQ4P56696 695 aa35.54■■■■□ 3.28
CCM2-211ENST00000478582 ZNF827Q17R98 1081 aa35.54■■■■□ 3.28
CCM2-211ENST00000478582 AKT1S1Q96B36 256 aa35.54■■■■□ 3.28
CCM2-211ENST00000478582 MRS2Q9HD23 443 aa35.54■■■■□ 3.28
CCM2-211ENST00000478582 CCNL1Q9UK58 526 aaPredicted RBP35.54■■■■□ 3.28
CCM2-211ENST00000478582 ERVV-2B6SEH9 535 aa35.53■■■■□ 3.28
CCM2-211ENST00000478582 KDM6AO15550 1401 aaPredicted RBP35.53■■■■□ 3.28
CCM2-211ENST00000478582 PIGBQ92521 554 aa35.52■■■■□ 3.28
CCM2-211ENST00000478582 PNISRQ8TF01 805 aaKnown RBP35.5■■■■□ 3.27
CCM2-211ENST00000478582 SMARCC1Q92922 1105 aaPredicted RBP35.5■■■■□ 3.27
CCM2-211ENST00000478582 GNAT3A8MTJ3 354 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms