RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 TRIM46Q7Z4K8 759 aa9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 TERTO14746 1132 aaKnown RBP9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 ATP9BO43861 1147 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 UPP2O95045 317 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 SCTRP47872 440 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 SCARF1Q14162 830 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 PLEKHM2Q8IWE5 1019 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
SMNDC1-205ENST00000477763 WIPF1O43516 503 aa9.02□□□□□ -0.97
SMNDC1-205ENST00000477763 BMP1P13497 986 aa9.02□□□□□ -0.97
SMNDC1-205ENST00000477763 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
SMNDC1-205ENST00000477763 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
SMNDC1-205ENST00000477763 OXLD1Q5BKU9 147 aa9.01□□□□□ -0.97
SMNDC1-205ENST00000477763 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
SMNDC1-205ENST00000477763 KIFC2Q96AC6 838 aa9.01□□□□□ -0.97
SMNDC1-205ENST00000477763 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
SMNDC1-205ENST00000477763 PTGIRP43119 386 aa9□□□□□ -0.97
SMNDC1-205ENST00000477763 EML3Q32P44 896 aa9□□□□□ -0.97
SMNDC1-205ENST00000477763 KDF1Q8NAX2 398 aaPredicted RBP9□□□□□ -0.97
SMNDC1-205ENST00000477763 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
SMNDC1-205ENST00000477763 PALM3A6NDB9 673 aaPredicted RBP8.99□□□□□ -0.97
SMNDC1-205ENST00000477763 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
SMNDC1-205ENST00000477763 SPINT1O43278 529 aa8.99□□□□□ -0.97
SMNDC1-205ENST00000477763 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
SMNDC1-205ENST00000477763 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 GNRH1P01148 92 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 BMP2P12643 396 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 NCOA4Q13772 614 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 USP17L2Q6R6M4 530 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 AGBL1Q96MI9 1066 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
SMNDC1-205ENST00000477763 RELBQ01201 579 aa8.97□□□□□ -0.97
SMNDC1-205ENST00000477763 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
SMNDC1-205ENST00000477763 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
SMNDC1-205ENST00000477763 TRIM50Q86XT4 487 aa8.95□□□□□ -0.98
SMNDC1-205ENST00000477763 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
SMNDC1-205ENST00000477763 A0A1W2PRU2 124 aa8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 ARID3CA6NKF2 412 aa8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 CLN3Q13286 438 aa8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 CFAP70Q5T0N1 1121 aa8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 CCDC97Q96F63 343 aaPredicted RBP8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 PCDHGA11Q9Y5H2 935 aa8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 SOS2Q07890 1332 aaPredicted RBP8.94□□□□□ -0.98
SMNDC1-205ENST00000477763 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
SMNDC1-205ENST00000477763 ATP1A2P50993 1020 aa8.93□□□□□ -0.98
SMNDC1-205ENST00000477763 GTF2IP78347 998 aa8.93□□□□□ -0.98
SMNDC1-205ENST00000477763 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
SMNDC1-205ENST00000477763 TTLL8A6PVC2 850 aa8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 GPC1P35052 558 aa8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 INSM1Q01101 510 aaPredicted RBP8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 INSM2Q96T92 566 aaPredicted RBP8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 ARHGEF10LQ9HCE6 1279 aa8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 STK17AQ9UEE5 414 aa8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 MKRN1Q9UHC7 482 aaKnown RBP8.92□□□□□ -0.98
SMNDC1-205ENST00000477763 RNF144AP50876 292 aaPredicted RBP8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 XAGE2Q96GT9 111 aa8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 NLRP3Q96P20 1036 aa8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 C1orf115Q9H7X2 142 aa8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 POLMQ9NP87 494 aaPredicted RBP8.91□□□□□ -0.98
SMNDC1-205ENST00000477763 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
SMNDC1-205ENST00000477763 SCNN1DP51172 638 aa8.9□□□□□ -0.98
SMNDC1-205ENST00000477763 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
SMNDC1-205ENST00000477763 HRH3Q9Y5N1 445 aa8.9□□□□□ -0.98
SMNDC1-205ENST00000477763 MEN1O00255 615 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 IL2RAP01589 272 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 VEGFBP49765 207 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 FOXD4L5Q5VV16 416 aaPredicted RBP8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 CNKSR1Q969H4 720 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 ETNK1Q9HBU6 452 aa8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 DNAAF2Q9NVR5 837 aaKnown RBP8.89□□□□□ -0.99
SMNDC1-205ENST00000477763 MAN1A2O60476 641 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 INHAP05111 366 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 GDF10P55107 478 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 CLDN10P78369 228 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 CCDC82Q8N4S0 544 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 RAB6BQ9NRW1 208 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
SMNDC1-205ENST00000477763 TMEM229AB2RXF0 380 aa8.87□□□□□ -0.99
SMNDC1-205ENST00000477763 ZBTB7BO15156 539 aaPredicted RBP8.87□□□□□ -0.99
SMNDC1-205ENST00000477763 GMPRP36959 345 aa8.87□□□□□ -0.99
SMNDC1-205ENST00000477763 PSME1Q06323 249 aa8.87□□□□□ -0.99
SMNDC1-205ENST00000477763 SIX5Q8N196 739 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms