RNA–Protein interactions for RNA: ENST00000475915.6

PDCD10-209, Transcript of programmed cell death 10, human

TSL 5

Gene PDCD10, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD10-209	ENST00000475915	USP17L2	Q6R6M4	530 aa		11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	USP17L1	Q7RTZ2	530 aa		11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	OSBPL3	Q9H4L5	887 aa		11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	ATP13A2	Q9NQ11	1180 aa		11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	SERPINA10	Q9UK55	444 aa		11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.35	□□□□□ -0.59
PDCD10-209	ENST00000475915	UPP2	O95045	317 aa		11.34	□□□□□ -0.59
PDCD10-209	ENST00000475915	NCOA4	Q13772	614 aa		11.34	□□□□□ -0.59
PDCD10-209	ENST00000475915	CYP2U1	Q7Z449	544 aa		11.34	□□□□□ -0.59
PDCD10-209	ENST00000475915	TRIM46	Q7Z4K8	759 aa		11.34	□□□□□ -0.59
PDCD10-209	ENST00000475915	LINC00528	Q8N1L1	170 aa		11.34	□□□□□ -0.59
PDCD10-209	ENST00000475915	CCDC97	Q96F63	343 aa	Predicted RBP	11.33	□□□□□ -0.6
PDCD10-209	ENST00000475915	C1orf115	Q9H7X2	142 aa		11.33	□□□□□ -0.6
PDCD10-209	ENST00000475915	ATP5J2-PTCD1	G3V325	749 aa		11.32	□□□□□ -0.6
PDCD10-209	ENST00000475915	BMP1	P13497	986 aa		11.32	□□□□□ -0.6
PDCD10-209	ENST00000475915	KDF1	Q8NAX2	398 aa	Predicted RBP	11.32	□□□□□ -0.6
PDCD10-209	ENST00000475915	DACH1	Q9UI36	760 aa		11.32	□□□□□ -0.6
PDCD10-209	ENST00000475915	NOD1	Q9Y239	953 aa		11.32	□□□□□ -0.6
PDCD10-209	ENST00000475915	SCARF1	Q14162	830 aa		11.31	□□□□□ -0.6
PDCD10-209	ENST00000475915	CFAP70	Q5T0N1	1121 aa		11.31	□□□□□ -0.6
PDCD10-209	ENST00000475915	DEPDC4	Q8N2C3	294 aa		11.31	□□□□□ -0.6
PDCD10-209	ENST00000475915	PTGIR	P43119	386 aa		11.3	□□□□□ -0.6
PDCD10-209	ENST00000475915	AGBL1	Q96MI9	1066 aa		11.3	□□□□□ -0.6
PDCD10-209	ENST00000475915	SPINT1	O43278	529 aa		11.29	□□□□□ -0.6
PDCD10-209	ENST00000475915	GNRH1	P01148	92 aa		11.29	□□□□□ -0.6
PDCD10-209	ENST00000475915	TRIM50	Q86XT4	487 aa		11.29	□□□□□ -0.6
PDCD10-209	ENST00000475915	CCDC82	Q8N4S0	544 aa		11.29	□□□□□ -0.6
PDCD10-209	ENST00000475915	SUPT5H	O00267	1087 aa	Known RBP	11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	BMP2	P12643	396 aa		11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	LMOD1	P29536	600 aa	Predicted RBP	11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	RELB	Q01201	579 aa		11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	PURB	Q96QR8	312 aa	Known RBP	11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	SENP2	Q9HC62	589 aa		11.28	□□□□□ -0.6
PDCD10-209	ENST00000475915	ZFP42	Q96MM3	310 aa		11.27	□□□□□ -0.61
PDCD10-209	ENST00000475915	MKRN1	Q9UHC7	482 aa	Known RBP	11.27	□□□□□ -0.61
PDCD10-209	ENST00000475915	PCDHGA11	Q9Y5H2	935 aa		11.27	□□□□□ -0.61
PDCD10-209	ENST00000475915	ATP1A2	P50993	1020 aa		11.26	□□□□□ -0.61
PDCD10-209	ENST00000475915	GTF2I	P78347	998 aa		11.26	□□□□□ -0.61
PDCD10-209	ENST00000475915	C6orf118	Q5T5N4	469 aa		11.26	□□□□□ -0.61
PDCD10-209	ENST00000475915	KIFC2	Q96AC6	838 aa		11.26	□□□□□ -0.61
PDCD10-209	ENST00000475915	CLN3	Q13286	438 aa		11.25	□□□□□ -0.61
PDCD10-209	ENST00000475915	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.25	□□□□□ -0.61
PDCD10-209	ENST00000475915		A0A1W2PRU2	124 aa		11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	ESCO1	Q5FWF5	840 aa		11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	KANK4	Q5T7N3	995 aa	Predicted RBP	11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	TRIM47	Q96LD4	638 aa		11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	ARHGEF10L	Q9HCE6	1279 aa		11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	GMPR2	Q9P2T1	348 aa	Known RBP	11.24	□□□□□ -0.61
PDCD10-209	ENST00000475915	WASL	O00401	505 aa	Predicted RBP	11.23	□□□□□ -0.61
PDCD10-209	ENST00000475915	VRTN	Q9H8Y1	702 aa		11.23	□□□□□ -0.61
PDCD10-209	ENST00000475915	CLDN10	P78369	228 aa		11.22	□□□□□ -0.61
PDCD10-209	ENST00000475915	SOS2	Q07890	1332 aa	Predicted RBP	11.22	□□□□□ -0.61
PDCD10-209	ENST00000475915	LARGE2	Q8N3Y3	721 aa		11.22	□□□□□ -0.61
PDCD10-209	ENST00000475915	OGFOD1	Q8N543	542 aa		11.22	□□□□□ -0.61
PDCD10-209	ENST00000475915	INSM2	Q96T92	566 aa	Predicted RBP	11.22	□□□□□ -0.61
PDCD10-209	ENST00000475915	GPC1	P35052	558 aa		11.21	□□□□□ -0.61
PDCD10-209	ENST00000475915	SCNN1D	P51172	638 aa		11.21	□□□□□ -0.61
PDCD10-209	ENST00000475915	ESYT1	Q9BSJ8	1104 aa		11.21	□□□□□ -0.61
PDCD10-209	ENST00000475915	ETNK1	Q9HBU6	452 aa		11.21	□□□□□ -0.61
PDCD10-209	ENST00000475915	DNAAF2	Q9NVR5	837 aa	Known RBP	11.21	□□□□□ -0.61
PDCD10-209	ENST00000475915	RFX1	P22670	979 aa		11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	GDF10	P55107	478 aa		11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	SRPK2	P78362	688 aa	Known RBP	11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	SIX5	Q8N196	739 aa		11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	XAGE2	Q96GT9	111 aa		11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	RAB6B	Q9NRW1	208 aa		11.2	□□□□□ -0.62
PDCD10-209	ENST00000475915	FAM196B	A6NMK8	535 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	TTLL8	A6PVC2	850 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	MEN1	O00255	615 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	ZBTB7B	O15156	539 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	IL2RA	P01589	272 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	INHA	P05111	366 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	RASA1	P20936	1047 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	CTSO	P43234	321 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	RNF144A	P50876	292 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	PSME1	Q06323	249 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	CNKSR1	Q969H4	720 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	NLRP3	Q96P20	1036 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	POLM	Q9NP87	494 aa	Predicted RBP	11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	KIAA1024	Q9UPX6	916 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	HRH3	Q9Y5N1	445 aa		11.19	□□□□□ -0.62
PDCD10-209	ENST00000475915	TMEM229A	B2RXF0	380 aa		11.18	□□□□□ -0.62
PDCD10-209	ENST00000475915	LARP1	Q6PKG0	1096 aa	Known RBP	11.18	□□□□□ -0.62
PDCD10-209	ENST00000475915	PBXIP1	Q96AQ6	731 aa		11.18	□□□□□ -0.62
PDCD10-209	ENST00000475915	C11orf95	C9JLR9	678 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD10-209	ENST00000475915	PTK7	Q13308	1070 aa		11.17	□□□□□ -0.62
PDCD10-209	ENST00000475915	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.17	□□□□□ -0.62
PDCD10-209	ENST00000475915	CCDC102B	Q68D86	513 aa		11.17	□□□□□ -0.62
PDCD10-209	ENST00000475915	RNF217	Q8TC41	542 aa		11.17	□□□□□ -0.62
PDCD10-209	ENST00000475915	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	POTEC	B2RU33	542 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L15	C9J2P7	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L10	C9JJH3	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L13	C9JLJ4	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L12	C9JPN9	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L11	C9JVI0	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L21	D6R901	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L18	D6R9N7	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L22	D6RA61	530 aa		11.16	□□□□□ -0.62
PDCD10-209	ENST00000475915	USP17L17	D6RBQ6	530 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms