RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 RRP7AQ9Y3A4 280 aaKnown RBP26.78■■□□□ 1.88
CDHR3-210ENST00000474330 RGPD2P0DJD1 1756 aa26.78■■□□□ 1.88
CDHR3-210ENST00000474330 EVA1CP58658 441 aa26.76■■□□□ 1.87
CDHR3-210ENST00000474330 NEUROD2Q15784 382 aa26.76■■□□□ 1.87
CDHR3-210ENST00000474330 LARP1Q6PKG0 1096 aaKnown RBP26.76■■□□□ 1.87
CDHR3-210ENST00000474330 WWC1Q8IX03 1113 aa26.76■■□□□ 1.87
CDHR3-210ENST00000474330 PHACTR3Q96KR7 559 aa26.76■■□□□ 1.87
CDHR3-210ENST00000474330 COL5A2P05997 1499 aaPredicted RBP26.76■■□□□ 1.87
CDHR3-210ENST00000474330 GOLGA2Q08379 1002 aa26.74■■□□□ 1.87
CDHR3-210ENST00000474330 ANKRD24Q8TF21 1146 aa26.74■■□□□ 1.87
CDHR3-210ENST00000474330 ERBB3P21860 1342 aa26.73■■□□□ 1.87
CDHR3-210ENST00000474330 CDCA7LQ96GN5 454 aa26.73■■□□□ 1.87
CDHR3-210ENST00000474330 THSD7AQ9UPZ6 1657 aa26.73■■□□□ 1.87
CDHR3-210ENST00000474330 NFE2L2Q16236 605 aa26.72■■□□□ 1.87
CDHR3-210ENST00000474330 NBPF6Q5VWK0 638 aa26.72■■□□□ 1.87
CDHR3-210ENST00000474330 NBPF4Q96M43 638 aa26.72■■□□□ 1.87
CDHR3-210ENST00000474330 RIPK4P57078 832 aa26.71■■□□□ 1.87
CDHR3-210ENST00000474330 WDR63Q8IWG1 891 aa26.7■■□□□ 1.86
CDHR3-210ENST00000474330 USP35Q9P2H5 1018 aa26.7■■□□□ 1.86
CDHR3-210ENST00000474330 NCAPD2Q15021 1401 aa26.7■■□□□ 1.86
CDHR3-210ENST00000474330 TRIM35Q9UPQ4 493 aa26.69■■□□□ 1.86
CDHR3-210ENST00000474330 DLG5Q8TDM6 1919 aa26.69■■□□□ 1.86
CDHR3-210ENST00000474330 KRT27Q7Z3Y8 459 aa26.68■■□□□ 1.86
CDHR3-210ENST00000474330 SLFN5Q08AF3 891 aa26.68■■□□□ 1.86
CDHR3-210ENST00000474330 BARGINQ6ZT62 677 aa26.67■■□□□ 1.86
CDHR3-210ENST00000474330 A0A0G2JS52 829 aa26.66■■□□□ 1.86
CDHR3-210ENST00000474330 MYT1Q01538 1121 aa26.66■■□□□ 1.86
CDHR3-210ENST00000474330 TRMT2AQ8IZ69 625 aaKnown RBP26.66■■□□□ 1.86
CDHR3-210ENST00000474330 CSB-PGBD3P0DP91 1061 aa26.65■■□□□ 1.86
CDHR3-210ENST00000474330 CRB1P82279 1406 aa26.65■■□□□ 1.86
CDHR3-210ENST00000474330 E9PSI1 815 aa26.65■■□□□ 1.86
CDHR3-210ENST00000474330 USHBP1Q8N6Y0 703 aa26.65■■□□□ 1.86
CDHR3-210ENST00000474330 WDR17Q8IZU2 1322 aa26.64■■□□□ 1.86
CDHR3-210ENST00000474330 DUSP27Q5VZP5 1158 aa26.64■■□□□ 1.85
CDHR3-210ENST00000474330 SPINK5Q9NQ38 1064 aaPredicted RBP26.63■■□□□ 1.85
CDHR3-210ENST00000474330 THRAP3Q9Y2W1 955 aaKnown RBP26.63■■□□□ 1.85
CDHR3-210ENST00000474330 LMOD3Q0VAK6 560 aa26.62■■□□□ 1.85
CDHR3-210ENST00000474330 FAM182BQ5T319 152 aa26.61■■□□□ 1.85
CDHR3-210ENST00000474330 GAS2L2Q8NHY3 880 aa26.61■■□□□ 1.85
CDHR3-210ENST00000474330 NLRP2Q9NX02 1062 aa26.61■■□□□ 1.85
CDHR3-210ENST00000474330 IL16Q14005 1332 aa26.6■■□□□ 1.85
CDHR3-210ENST00000474330 MTHFSDQ2M296 383 aaKnown RBP26.6■■□□□ 1.85
CDHR3-210ENST00000474330 TOM1L2Q6ZVM7 507 aa26.6■■□□□ 1.85
CDHR3-210ENST00000474330 CCDC125Q86Z20 511 aa26.59■■□□□ 1.85
CDHR3-210ENST00000474330 PARP4Q9UKK3 1724 aaKnown RBP26.57■■□□□ 1.84
CDHR3-210ENST00000474330 CARD10Q9BWT7 1032 aa26.56■■□□□ 1.84
CDHR3-210ENST00000474330 WNK3Q9BYP7 1800 aa26.55■■□□□ 1.84
CDHR3-210ENST00000474330 CALD1Q05682 793 aaKnown RBP26.55■■□□□ 1.84
CDHR3-210ENST00000474330 MYH16Q9H6N6 1097 aa26.54■■□□□ 1.84
CDHR3-210ENST00000474330 SUPT16HQ9Y5B9 1047 aaKnown RBP26.53■■□□□ 1.84
CDHR3-210ENST00000474330 PLEKHG2Q9H7P9 1386 aa26.53■■□□□ 1.84
CDHR3-210ENST00000474330 HTATSF1O43719 755 aaKnown RBP26.52■■□□□ 1.84
CDHR3-210ENST00000474330 AMOTQ4VCS5 1084 aa26.52■■□□□ 1.84
CDHR3-210ENST00000474330 PLEKHO1Q53GL0 409 aaPredicted RBP26.52■■□□□ 1.84
CDHR3-210ENST00000474330 RAPGEF4Q8WZA2 1011 aa26.5■■□□□ 1.83
CDHR3-210ENST00000474330 THUMPD2Q9BTF0 503 aaKnown RBP26.5■■□□□ 1.83
CDHR3-210ENST00000474330 LRRC37A3O60309 1634 aa26.49■■□□□ 1.83
CDHR3-210ENST00000474330 GNAT3A8MTJ3 354 aa26.49■■□□□ 1.83
CDHR3-210ENST00000474330 RCAN3Q9UKA8 241 aa26.49■■□□□ 1.83
CDHR3-210ENST00000474330 DCTN1Q14203 1278 aa26.48■■□□□ 1.83
CDHR3-210ENST00000474330 RTF1Q92541 710 aaKnown RBP26.48■■□□□ 1.83
CDHR3-210ENST00000474330 DISP2A7MBM2 1401 aa26.48■■□□□ 1.83
CDHR3-210ENST00000474330 MEGF6O75095 1541 aa26.48■■□□□ 1.83
CDHR3-210ENST00000474330 MAP3K5Q99683 1374 aa26.48■■□□□ 1.83
CDHR3-210ENST00000474330 TATP17735 454 aaPredicted RBP26.47■■□□□ 1.83
CDHR3-210ENST00000474330 DEFB132Q7Z7B7 95 aa26.47■■□□□ 1.83
CDHR3-210ENST00000474330 PKD1L3Q7Z443 1732 aa26.47■■□□□ 1.83
CDHR3-210ENST00000474330 FAM196AQ6ZSG2 479 aa26.47■■□□□ 1.83
CDHR3-210ENST00000474330 IFT57Q9NWB7 429 aa26.47■■□□□ 1.83
CDHR3-210ENST00000474330 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
CDHR3-210ENST00000474330 ZNF853P0CG23 659 aa26.46■■□□□ 1.83
CDHR3-210ENST00000474330 GNAI1P63096 354 aa26.46■■□□□ 1.83
CDHR3-210ENST00000474330 MCM10Q7L590 875 aa26.46■■□□□ 1.83
CDHR3-210ENST00000474330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.46■■□□□ 1.83
CDHR3-210ENST00000474330 GTF3C3Q9Y5Q9 886 aa26.46■■□□□ 1.83
CDHR3-210ENST00000474330 DDB1Q16531 1140 aa26.44■■□□□ 1.82
CDHR3-210ENST00000474330 AKAP4Q5JQC9 854 aa26.44■■□□□ 1.82
CDHR3-210ENST00000474330 CFAP44Q96MT7 982 aa26.44■■□□□ 1.82
CDHR3-210ENST00000474330 CDCA7Q9BWT1 371 aaPredicted RBP26.44■■□□□ 1.82
CDHR3-210ENST00000474330 RNF123Q5XPI4 1314 aa26.44■■□□□ 1.82
CDHR3-210ENST00000474330 TNS1Q9HBL0 1735 aaKnown RBP26.44■■□□□ 1.82
CDHR3-210ENST00000474330 ZNF530Q6P9A1 599 aaPredicted RBP26.43■■□□□ 1.82
CDHR3-210ENST00000474330 TSR2Q969E8 191 aaKnown RBP26.43■■□□□ 1.82
CDHR3-210ENST00000474330 OVOS2A0A0G2JMS6 1433 aa26.42■■□□□ 1.82
CDHR3-210ENST00000474330 IL2RBP14784 551 aa26.42■■□□□ 1.82
CDHR3-210ENST00000474330 SF3B2Q13435 895 aaKnown RBP26.42■■□□□ 1.82
CDHR3-210ENST00000474330 SPG7Q9UQ90 795 aa26.41■■□□□ 1.82
CDHR3-210ENST00000474330 LAS1LQ9Y4W2 734 aaKnown RBP26.41■■□□□ 1.82
CDHR3-210ENST00000474330 TRIM37O94972 964 aa26.4■■□□□ 1.82
CDHR3-210ENST00000474330 IL17REQ8NFR9 667 aa26.4■■□□□ 1.82
CDHR3-210ENST00000474330 VIRMAQ69YN4 1812 aaKnown RBP26.4■■□□□ 1.82
CDHR3-210ENST00000474330 SBF2Q86WG5 1849 aa26.4■■□□□ 1.82
CDHR3-210ENST00000474330 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
CDHR3-210ENST00000474330 MARCH10Q8NA82 808 aaPredicted RBP26.39■■□□□ 1.82
CDHR3-210ENST00000474330 SHANK3Q9BYB0 1731 aa26.39■■□□□ 1.81
CDHR3-210ENST00000474330 CHL1O00533 1208 aa26.38■■□□□ 1.81
CDHR3-210ENST00000474330 CT47B1P0C2W7 299 aaPredicted RBP26.38■■□□□ 1.81
CDHR3-210ENST00000474330 MBIPQ9NS73 344 aa26.38■■□□□ 1.81
CDHR3-210ENST00000474330 CEMIPQ8WUJ3 1361 aa26.37■■□□□ 1.81
CDHR3-210ENST00000474330 EXOC5O00471 708 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms