RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 A0A1W2PRU2 124 aa8.65□□□□□ -1.02
TMEM50B-208ENST00000474272 SCTRP47872 440 aa8.65□□□□□ -1.02
TMEM50B-208ENST00000474272 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
TMEM50B-208ENST00000474272 KCNMA1Q12791 1236 aa8.65□□□□□ -1.02
TMEM50B-208ENST00000474272 SNRKQ9NRH2 765 aa8.64□□□□□ -1.03
TMEM50B-208ENST00000474272 GPR25O00155 361 aa8.63□□□□□ -1.03
TMEM50B-208ENST00000474272 GPR37L1O60883 481 aa8.63□□□□□ -1.03
TMEM50B-208ENST00000474272 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
TMEM50B-208ENST00000474272 POU4F2Q12837 409 aa8.63□□□□□ -1.03
TMEM50B-208ENST00000474272 GAS6Q14393 721 aa8.63□□□□□ -1.03
TMEM50B-208ENST00000474272 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 RASSF7Q02833 373 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 NR1H3Q13133 447 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 RIPOR1Q6ZS17 1223 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 MTMR14Q8NCE2 650 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 PCDHB11Q9Y5F2 797 aa8.62□□□□□ -1.03
TMEM50B-208ENST00000474272 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
TMEM50B-208ENST00000474272 LYPD4Q6UWN0 246 aa8.61□□□□□ -1.03
TMEM50B-208ENST00000474272 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 GDF11O95390 407 aa8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 DBN1Q16643 649 aa8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
TMEM50B-208ENST00000474272 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
TMEM50B-208ENST00000474272 ZNF837Q96EG3 531 aaPredicted RBP8.59□□□□□ -1.03
TMEM50B-208ENST00000474272 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
TMEM50B-208ENST00000474272 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
TMEM50B-208ENST00000474272 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
TMEM50B-208ENST00000474272 IRS1P35568 1242 aa8.58□□□□□ -1.04
TMEM50B-208ENST00000474272 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
TMEM50B-208ENST00000474272 GPC1P35052 558 aa8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 NDUFB9Q9Y6M9 179 aa8.57□□□□□ -1.04
TMEM50B-208ENST00000474272 CELA2BP08218 269 aaPredicted RBP8.56□□□□□ -1.04
TMEM50B-208ENST00000474272 MARSP56192 900 aaKnown RBP8.56□□□□□ -1.04
TMEM50B-208ENST00000474272 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
TMEM50B-208ENST00000474272 CLN3Q13286 438 aa8.56□□□□□ -1.04
TMEM50B-208ENST00000474272 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
TMEM50B-208ENST00000474272 TRAK2O60296 914 aa8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 TSGA10IPQ3SY00 556 aa8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 ESF1Q9H501 851 aaKnown RBP8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
TMEM50B-208ENST00000474272 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
TMEM50B-208ENST00000474272 CEP126Q9P2H0 1117 aa8.54□□□□□ -1.04
TMEM50B-208ENST00000474272 ZNF330Q9Y3S2 320 aaPredicted RBP8.54□□□□□ -1.04
TMEM50B-208ENST00000474272 STAU1O95793 577 aaKnown RBP8.53□□□□□ -1.04
TMEM50B-208ENST00000474272 PHKA2P46019 1235 aa8.53□□□□□ -1.04
TMEM50B-208ENST00000474272 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
TMEM50B-208ENST00000474272 TBC1D2BQ9UPU7 963 aa8.53□□□□□ -1.04
TMEM50B-208ENST00000474272 IGF1RP08069 1367 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 RNF225M0QZC1 329 aaPredicted RBP8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 IL2RAP01589 272 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 MBIPQ9NS73 344 aa8.52□□□□□ -1.05
TMEM50B-208ENST00000474272 CENPCQ03188 943 aa8.51□□□□□ -1.05
TMEM50B-208ENST00000474272 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
TMEM50B-208ENST00000474272 TPRNQ4KMQ1 711 aa8.51□□□□□ -1.05
TMEM50B-208ENST00000474272 TAS1R3Q7RTX0 852 aa8.51□□□□□ -1.05
TMEM50B-208ENST00000474272 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
TMEM50B-208ENST00000474272 WASLO00401 505 aaPredicted RBP8.5□□□□□ -1.05
TMEM50B-208ENST00000474272 H7C1W4 665 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 THBS1P07996 1170 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 GPAT2Q6NUI2 795 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 ACDQ96AP0 544 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 GMCL1Q96IK5 515 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 ESYT1Q9BSJ8 1104 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
TMEM50B-208ENST00000474272 GNRH1P01148 92 aa8.48□□□□□ -1.05
TMEM50B-208ENST00000474272 F11P03951 625 aa8.48□□□□□ -1.05
TMEM50B-208ENST00000474272 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
TMEM50B-208ENST00000474272 NUCKS1Q9H1E3 243 aaKnown RBP8.48□□□□□ -1.05
TMEM50B-208ENST00000474272 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 MX2P20592 715 aa8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 IRF5Q13568 498 aa8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 TRERF1Q96PN7 1200 aa8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
TMEM50B-208ENST00000474272 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 SOCS7O14512 581 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 BCRP11274 1271 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 NEDD1Q8NHV4 660 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 HRH3Q9Y5N1 445 aa8.46□□□□□ -1.06
TMEM50B-208ENST00000474272 APBB1O00213 710 aa8.45□□□□□ -1.06
TMEM50B-208ENST00000474272 VAC14Q08AM6 782 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1447.8 ms