RNA–Protein interactions for RNA: ENST00000470095.5

HPS1-209, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-209ENST00000470095 PDE3BQ13370 1112 aa18.69■□□□□ 0.58
HPS1-209ENST00000470095 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
HPS1-209ENST00000470095 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
HPS1-209ENST00000470095 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
HPS1-209ENST00000470095 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
HPS1-209ENST00000470095 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
HPS1-209ENST00000470095 CDCA7LQ96GN5 454 aa18.68■□□□□ 0.58
HPS1-209ENST00000470095 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
HPS1-209ENST00000470095 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
HPS1-209ENST00000470095 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
HPS1-209ENST00000470095 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
HPS1-209ENST00000470095 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
HPS1-209ENST00000470095 GOLGA2Q08379 1002 aa18.66■□□□□ 0.58
HPS1-209ENST00000470095 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
HPS1-209ENST00000470095 NGLY1Q96IV0 654 aa18.66■□□□□ 0.58
HPS1-209ENST00000470095 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
HPS1-209ENST00000470095 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
HPS1-209ENST00000470095 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
HPS1-209ENST00000470095 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
HPS1-209ENST00000470095 UNC5CLQ8IV45 518 aa18.65■□□□□ 0.58
HPS1-209ENST00000470095 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
HPS1-209ENST00000470095 ADAMTS7Q9UKP4 1686 aa18.64■□□□□ 0.57
HPS1-209ENST00000470095 SLFN5Q08AF3 891 aa18.64■□□□□ 0.57
HPS1-209ENST00000470095 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.57
HPS1-209ENST00000470095 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
HPS1-209ENST00000470095 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
HPS1-209ENST00000470095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
HPS1-209ENST00000470095 VIRMAQ69YN4 1812 aaKnown RBP18.64■□□□□ 0.57
HPS1-209ENST00000470095 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
HPS1-209ENST00000470095 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
HPS1-209ENST00000470095 IL2RBP14784 551 aa18.63■□□□□ 0.57
HPS1-209ENST00000470095 IL16Q14005 1332 aa18.63■□□□□ 0.57
HPS1-209ENST00000470095 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
HPS1-209ENST00000470095 DCTN1Q14203 1278 aa18.62■□□□□ 0.57
HPS1-209ENST00000470095 TRMT2AQ8IZ69 625 aaKnown RBP18.62■□□□□ 0.57
HPS1-209ENST00000470095 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
HPS1-209ENST00000470095 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
HPS1-209ENST00000470095 E9PSI1 815 aa18.61■□□□□ 0.57
HPS1-209ENST00000470095 VPS72Q15906 364 aa18.61■□□□□ 0.57
HPS1-209ENST00000470095 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
HPS1-209ENST00000470095 AFF2P51816 1311 aa18.6■□□□□ 0.57
HPS1-209ENST00000470095 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
HPS1-209ENST00000470095 MCM10Q7L590 875 aa18.6■□□□□ 0.57
HPS1-209ENST00000470095 USP21Q9UK80 565 aa18.6■□□□□ 0.57
HPS1-209ENST00000470095 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
HPS1-209ENST00000470095 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
HPS1-209ENST00000470095 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
HPS1-209ENST00000470095 SCN11AQ9UI33 1791 aa18.59■□□□□ 0.57
HPS1-209ENST00000470095 ATRNO75882 1429 aa18.58■□□□□ 0.57
HPS1-209ENST00000470095 CYP27B1O15528 508 aa18.58■□□□□ 0.56
HPS1-209ENST00000470095 PHKG2P15735 406 aa18.58■□□□□ 0.56
HPS1-209ENST00000470095 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
HPS1-209ENST00000470095 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
HPS1-209ENST00000470095 ZCRB1Q8TBF4 217 aaKnown RBP18.58■□□□□ 0.56
HPS1-209ENST00000470095 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
HPS1-209ENST00000470095 GLI3P10071 1580 aa18.58■□□□□ 0.56
HPS1-209ENST00000470095 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
HPS1-209ENST00000470095 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
HPS1-209ENST00000470095 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
HPS1-209ENST00000470095 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
HPS1-209ENST00000470095 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
HPS1-209ENST00000470095 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
HPS1-209ENST00000470095 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
HPS1-209ENST00000470095 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
HPS1-209ENST00000470095 IFT57Q9NWB7 429 aa18.56■□□□□ 0.56
HPS1-209ENST00000470095 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
HPS1-209ENST00000470095 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
HPS1-209ENST00000470095 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
HPS1-209ENST00000470095 MRC1P22897 1456 aa18.55■□□□□ 0.56
HPS1-209ENST00000470095 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
HPS1-209ENST00000470095 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
HPS1-209ENST00000470095 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
HPS1-209ENST00000470095 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
HPS1-209ENST00000470095 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
HPS1-209ENST00000470095 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
HPS1-209ENST00000470095 GNAI1P63096 354 aa18.53■□□□□ 0.56
HPS1-209ENST00000470095 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
HPS1-209ENST00000470095 CFAP44Q96MT7 982 aa18.53■□□□□ 0.56
HPS1-209ENST00000470095 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
HPS1-209ENST00000470095 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
HPS1-209ENST00000470095 CHL1O00533 1208 aa18.51■□□□□ 0.55
HPS1-209ENST00000470095 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
HPS1-209ENST00000470095 NKX1-1Q15270 411 aaPredicted RBP18.51■□□□□ 0.55
HPS1-209ENST00000470095 MBIPQ9NS73 344 aa18.51■□□□□ 0.55
HPS1-209ENST00000470095 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
HPS1-209ENST00000470095 LAS1LQ9Y4W2 734 aaKnown RBP18.51■□□□□ 0.55
HPS1-209ENST00000470095 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
HPS1-209ENST00000470095 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
HPS1-209ENST00000470095 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
HPS1-209ENST00000470095 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
HPS1-209ENST00000470095 EXOC5O00471 708 aa18.48■□□□□ 0.55
HPS1-209ENST00000470095 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
HPS1-209ENST00000470095 EXOSC9Q06265 439 aaKnown RBP18.47■□□□□ 0.55
HPS1-209ENST00000470095 DDB1Q16531 1140 aa18.47■□□□□ 0.55
HPS1-209ENST00000470095 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
HPS1-209ENST00000470095 TEFQ10587 303 aa18.46■□□□□ 0.55
HPS1-209ENST00000470095 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
HPS1-209ENST00000470095 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
HPS1-209ENST00000470095 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
HPS1-209ENST00000470095 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms