RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 MAGEC2Q9UBF1 373 aaPredicted RBP18.7■□□□□ 0.58
BRAT1-204ENST00000469750 KRT18P05783 430 aaKnown RBP18.69■□□□□ 0.58
BRAT1-204ENST00000469750 CWC27Q6UX04 472 aaKnown RBP18.69■□□□□ 0.58
BRAT1-204ENST00000469750 KRT85P78386 507 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 KRT32Q14532 448 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 NME9Q86XW9 330 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 LARP1BQ659C4 914 aaKnown RBP18.69■□□□□ 0.58
BRAT1-204ENST00000469750 IGHMBP2P38935 993 aaKnown RBP18.69■□□□□ 0.58
BRAT1-204ENST00000469750 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 ZSCAN31Q96LW9 406 aaPredicted RBP18.69■□□□□ 0.58
BRAT1-204ENST00000469750 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
BRAT1-204ENST00000469750 PDRG1Q9NUG6 133 aa18.68■□□□□ 0.58
BRAT1-204ENST00000469750 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
BRAT1-204ENST00000469750 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
BRAT1-204ENST00000469750 TDO2P48775 406 aa18.68■□□□□ 0.58
BRAT1-204ENST00000469750 SMARCE1Q969G3 411 aa18.68■□□□□ 0.58
BRAT1-204ENST00000469750 CDKL5O76039 1030 aa18.68■□□□□ 0.58
BRAT1-204ENST00000469750 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
BRAT1-204ENST00000469750 CDR1P51861 262 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 CCDC173Q0VFZ6 552 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 RAI14Q9P0K7 980 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 ME1P48163 572 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-204ENST00000469750 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
BRAT1-204ENST00000469750 KIF1BPQ96EK5 621 aa18.67■□□□□ 0.58
BRAT1-204ENST00000469750 WASLO00401 505 aaPredicted RBP18.66■□□□□ 0.58
BRAT1-204ENST00000469750 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 AK7Q96M32 723 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 ZFYVE27Q5T4F4 411 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 IDI1Q13907 227 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
BRAT1-204ENST00000469750 LRP2BPQ9P2M1 347 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
BRAT1-204ENST00000469750 CCDC192P0DO97 292 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
BRAT1-204ENST00000469750 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
BRAT1-204ENST00000469750 HMGB2P26583 209 aaKnown RBP18.65■□□□□ 0.58
BRAT1-204ENST00000469750 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 RBM5P52756 815 aaKnown RBP eCLIP18.65■□□□□ 0.58
BRAT1-204ENST00000469750 NCOA1Q15788 1441 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 TMEM132AQ24JP5 1023 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 FBXO31Q5XUX0 539 aaPredicted RBP18.65■□□□□ 0.58
BRAT1-204ENST00000469750 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
BRAT1-204ENST00000469750 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.58
BRAT1-204ENST00000469750 RAB11FIP3O75154 756 aa18.64■□□□□ 0.58
BRAT1-204ENST00000469750 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.58
BRAT1-204ENST00000469750 TNMDQ9H2S6 317 aa18.64■□□□□ 0.58
BRAT1-204ENST00000469750 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.58
BRAT1-204ENST00000469750 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-204ENST00000469750 CCP110O43303 1012 aa18.64■□□□□ 0.57
BRAT1-204ENST00000469750 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
BRAT1-204ENST00000469750 TTLL5Q6EMB2 1281 aa18.64■□□□□ 0.57
BRAT1-204ENST00000469750 HSP90B2PQ58FF3 399 aa18.64■□□□□ 0.57
BRAT1-204ENST00000469750 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
BRAT1-204ENST00000469750 METTL24Q5JXM2 366 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 CIZ1Q9ULV3 898 aaPredicted RBP18.63■□□□□ 0.57
BRAT1-204ENST00000469750 AKAP2Q9Y2D5 859 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
BRAT1-204ENST00000469750 MX1P20591 662 aa18.62■□□□□ 0.57
BRAT1-204ENST00000469750 STIM1Q13586 685 aa18.62■□□□□ 0.57
BRAT1-204ENST00000469750 AIDAQ96BJ3 306 aa18.62■□□□□ 0.57
BRAT1-204ENST00000469750 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
BRAT1-204ENST00000469750 C11orf95C9JLR9 678 aaPredicted RBP18.62■□□□□ 0.57
BRAT1-204ENST00000469750 IMMTQ16891 758 aaKnown RBP18.61■□□□□ 0.57
BRAT1-204ENST00000469750 FOXO3O43524 673 aa18.61■□□□□ 0.57
BRAT1-204ENST00000469750 SERPINC1P01008 464 aa18.61■□□□□ 0.57
BRAT1-204ENST00000469750 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
BRAT1-204ENST00000469750 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
BRAT1-204ENST00000469750 ZSCAN29Q8IWY8 852 aaPredicted RBP18.61■□□□□ 0.57
BRAT1-204ENST00000469750 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
BRAT1-204ENST00000469750 DHX8Q14562 1220 aaKnown RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 SPATA32Q96LK8 384 aa18.6■□□□□ 0.57
BRAT1-204ENST00000469750 MYD88Q99836 296 aa18.6■□□□□ 0.57
BRAT1-204ENST00000469750 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
BRAT1-204ENST00000469750 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
BRAT1-204ENST00000469750 SYCP1Q15431 976 aa18.59■□□□□ 0.57
BRAT1-204ENST00000469750 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
BRAT1-204ENST00000469750 WASF1Q92558 559 aa18.59■□□□□ 0.57
BRAT1-204ENST00000469750 NOS1P29475 1434 aa18.59■□□□□ 0.57
BRAT1-204ENST00000469750 RDXP35241 583 aaKnown RBP18.58■□□□□ 0.57
BRAT1-204ENST00000469750 NSD2O96028 1365 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms