RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
PRPF3-202ENST00000467329 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
PRPF3-202ENST00000467329 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
PRPF3-202ENST00000467329 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-202ENST00000467329 PDE3AQ14432 1141 aa12.19□□□□□ -0.46
PRPF3-202ENST00000467329 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
PRPF3-202ENST00000467329 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
PRPF3-202ENST00000467329 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
PRPF3-202ENST00000467329 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
PRPF3-202ENST00000467329 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
PRPF3-202ENST00000467329 PKD1L3Q7Z443 1732 aa12.18□□□□□ -0.46
PRPF3-202ENST00000467329 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
PRPF3-202ENST00000467329 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
PRPF3-202ENST00000467329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■□□□ 11.6
PRPF3-202ENST00000467329 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-202ENST00000467329 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
PRPF3-202ENST00000467329 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
PRPF3-202ENST00000467329 PRDM11Q9NQV5 511 aa12.18□□□□□ -0.46
PRPF3-202ENST00000467329 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
PRPF3-202ENST00000467329 TOM1O60784 492 aa12.17□□□□□ -0.46
PRPF3-202ENST00000467329 BCAR3O75815 825 aa12.17□□□□□ -0.46
PRPF3-202ENST00000467329 MS4A1P11836 297 aa12.17□□□□□ -0.46
PRPF3-202ENST00000467329 AKAP4Q5JQC9 854 aa12.17□□□□□ -0.46
PRPF3-202ENST00000467329 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
PRPF3-202ENST00000467329 PLIN1O60240 522 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 MCM10Q7L590 875 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
PRPF3-202ENST00000467329 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 EXOC6Q8TAG9 804 aa12.16□□□□□ -0.46
PRPF3-202ENST00000467329 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
PRPF3-202ENST00000467329 AAMPQ13685 434 aa12.15□□□□□ -0.46
PRPF3-202ENST00000467329 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
PRPF3-202ENST00000467329 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
PRPF3-202ENST00000467329 NLRP2Q9NX02 1062 aa12.15□□□□□ -0.46
PRPF3-202ENST00000467329 VAMP4O75379 141 aa12.15□□□□□ -0.47
PRPF3-202ENST00000467329 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.47
PRPF3-202ENST00000467329 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.47
PRPF3-202ENST00000467329 CSB-PGBD3P0DP91 1061 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-202ENST00000467329 SMC4Q9NTJ3 1288 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 MEGF6O75095 1541 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
PRPF3-202ENST00000467329 IL17REQ8NFR9 667 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 SSH1Q8WYL5 1049 aa12.14□□□□□ -0.47
PRPF3-202ENST00000467329 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
PRPF3-202ENST00000467329 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
PRPF3-202ENST00000467329 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
PRPF3-202ENST00000467329 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
PRPF3-202ENST00000467329 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-202ENST00000467329 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
PRPF3-202ENST00000467329 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-202ENST00000467329 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-202ENST00000467329 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
PRPF3-202ENST00000467329 VIRMAQ69YN4 1812 aaKnown RBP12.12□□□□□ -0.47
PRPF3-202ENST00000467329 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
PRPF3-202ENST00000467329 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
PRPF3-202ENST00000467329 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
PRPF3-202ENST00000467329 MRC1P22897 1456 aa12.12□□□□□ -0.47
PRPF3-202ENST00000467329 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
PRPF3-202ENST00000467329 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
PRPF3-202ENST00000467329 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
PRPF3-202ENST00000467329 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
PRPF3-202ENST00000467329 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
PRPF3-202ENST00000467329 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
PRPF3-202ENST00000467329 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
PRPF3-202ENST00000467329 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
PRPF3-202ENST00000467329 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-202ENST00000467329 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
PRPF3-202ENST00000467329 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
PRPF3-202ENST00000467329 NRAPQ86VF7 1730 aa12.09□□□□□ -0.47
PRPF3-202ENST00000467329 HOXB7P09629 217 aa12.09□□□□□ -0.47
PRPF3-202ENST00000467329 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
PRPF3-202ENST00000467329 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
PRPF3-202ENST00000467329 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
PRPF3-202ENST00000467329 PHKG2P15735 406 aa12.08□□□□□ -0.48
PRPF3-202ENST00000467329 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
PRPF3-202ENST00000467329 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
PRPF3-202ENST00000467329 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
PRPF3-202ENST00000467329 TEFQ10587 303 aa12.08□□□□□ -0.48
PRPF3-202ENST00000467329 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
PRPF3-202ENST00000467329 WNK3Q9BYP7 1800 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
PRPF3-202ENST00000467329 TRIM27P14373 513 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 EVA1CP58658 441 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
PRPF3-202ENST00000467329 PANK1Q8TE04 598 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
PRPF3-202ENST00000467329 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
PRPF3-202ENST00000467329 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 CACNA1FO60840 1977 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 DISP2A7MBM2 1401 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 IL2RBP14784 551 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
PRPF3-202ENST00000467329 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
PRPF3-202ENST00000467329 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms