RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 IL13P35225 146 aa23.83■■□□□ 1.41
PCCB-207ENST00000466072 ACSBG1Q96GR2 724 aa23.83■■□□□ 1.41
PCCB-207ENST00000466072 TATP17735 454 aaPredicted RBP23.82■■□□□ 1.4
PCCB-207ENST00000466072 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
PCCB-207ENST00000466072 APBA3O96018 575 aa23.82■■□□□ 1.4
PCCB-207ENST00000466072 IGSF1Q8N6C5 1336 aa23.81■■□□□ 1.4
PCCB-207ENST00000466072 AEBP1Q8IUX7 1158 aa23.81■■□□□ 1.4
PCCB-207ENST00000466072 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
PCCB-207ENST00000466072 SHANK3Q9BYB0 1731 aa23.79■■□□□ 1.4
PCCB-207ENST00000466072 BAG6P46379 1132 aa23.79■■□□□ 1.4
PCCB-207ENST00000466072 EZH2Q15910 746 aaKnown RBP23.79■■□□□ 1.4
PCCB-207ENST00000466072 BCL9O00512 1426 aa23.78■■□□□ 1.4
PCCB-207ENST00000466072 SBF2Q86WG5 1849 aa23.78■■□□□ 1.4
PCCB-207ENST00000466072 PPP2R1AP30153 589 aa23.77■■□□□ 1.4
PCCB-207ENST00000466072 CAMKK2Q96RR4 588 aa23.77■■□□□ 1.4
PCCB-207ENST00000466072 CYP27B1O15528 508 aa23.76■■□□□ 1.39
PCCB-207ENST00000466072 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
PCCB-207ENST00000466072 SULT6B1Q6IMI4 303 aa23.75■■□□□ 1.39
PCCB-207ENST00000466072 COL3A1P02461 1466 aaPredicted RBP23.74■■□□□ 1.39
PCCB-207ENST00000466072 DIAPH1O60610 1272 aaKnown RBP23.73■■□□□ 1.39
PCCB-207ENST00000466072 HMOX1P09601 288 aa23.72■■□□□ 1.39
PCCB-207ENST00000466072 PARD3Q8TEW0 1356 aa23.71■■□□□ 1.39
PCCB-207ENST00000466072 PRIM1P49642 420 aaKnown RBP23.7■■□□□ 1.39
PCCB-207ENST00000466072 PCDH11XQ9BZA7 1347 aa23.7■■□□□ 1.39
PCCB-207ENST00000466072 PCDH11YQ9BZA8 1340 aa23.7■■□□□ 1.39
PCCB-207ENST00000466072 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
PCCB-207ENST00000466072 PKD1L3Q7Z443 1732 aa23.69■■□□□ 1.38
PCCB-207ENST00000466072 SYTL4Q96C24 671 aaPredicted RBP23.69■■□□□ 1.38
PCCB-207ENST00000466072 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
PCCB-207ENST00000466072 PROM2Q8N271 834 aa23.68■■□□□ 1.38
PCCB-207ENST00000466072 KDRP35968 1356 aa23.68■■□□□ 1.38
PCCB-207ENST00000466072 NHSQ6T4R5 1651 aa23.68■■□□□ 1.38
PCCB-207ENST00000466072 U2SURPO15042 1029 aaKnown RBP23.67■■□□□ 1.38
PCCB-207ENST00000466072 PLSCR1O15162 318 aa23.66■■□□□ 1.38
PCCB-207ENST00000466072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.66■■□□□ 1.38
PCCB-207ENST00000466072 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
PCCB-207ENST00000466072 PHKG2P15735 406 aa23.66■■□□□ 1.38
PCCB-207ENST00000466072 DOT1LQ8TEK3 1739 aa23.65■■□□□ 1.38
PCCB-207ENST00000466072 NKX1-1Q15270 411 aaPredicted RBP23.63■■□□□ 1.37
PCCB-207ENST00000466072 PLEKHO1Q53GL0 409 aaPredicted RBP23.63■■□□□ 1.37
PCCB-207ENST00000466072 IFNL2Q8IZJ0 200 aa23.63■■□□□ 1.37
PCCB-207ENST00000466072 CFAP53Q96M91 514 aa23.63■■□□□ 1.37
PCCB-207ENST00000466072 BTAF1O14981 1849 aa23.62■■□□□ 1.37
PCCB-207ENST00000466072 ZNF530Q6P9A1 599 aaPredicted RBP23.61■■□□□ 1.37
PCCB-207ENST00000466072 TOGARAM1Q9Y4F4 1720 aa23.61■■□□□ 1.37
PCCB-207ENST00000466072 PSDA5PKW4 1024 aaPredicted RBP23.61■■□□□ 1.37
PCCB-207ENST00000466072 RALBP1Q15311 655 aa23.6■■□□□ 1.37
PCCB-207ENST00000466072 TXNRD1Q16881 649 aa23.6■■□□□ 1.37
PCCB-207ENST00000466072 MPRIPQ6WCQ1 1025 aa23.6■■□□□ 1.37
PCCB-207ENST00000466072 KCNQ4P56696 695 aa23.59■■□□□ 1.37
PCCB-207ENST00000466072 RREB1Q92766 1687 aa23.59■■□□□ 1.37
PCCB-207ENST00000466072 AMOTQ4VCS5 1084 aa23.59■■□□□ 1.37
PCCB-207ENST00000466072 NUP188Q5SRE5 1749 aa23.57■■□□□ 1.36
PCCB-207ENST00000466072 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
PCCB-207ENST00000466072 MTHFSDQ2M296 383 aaKnown RBP23.57■■□□□ 1.36
PCCB-207ENST00000466072 PIGBQ92521 554 aa23.56■■□□□ 1.36
PCCB-207ENST00000466072 LRRC4BQ9NT99 713 aa23.56■■□□□ 1.36
PCCB-207ENST00000466072 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
PCCB-207ENST00000466072 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
PCCB-207ENST00000466072 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCCB-207ENST00000466072 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
PCCB-207ENST00000466072 PLEKHG2Q9H7P9 1386 aa23.55■■□□□ 1.36
PCCB-207ENST00000466072 KDM6AO15550 1401 aaPredicted RBP23.55■■□□□ 1.36
PCCB-207ENST00000466072 PHACTR3Q96KR7 559 aa23.55■■□□□ 1.36
PCCB-207ENST00000466072 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
PCCB-207ENST00000466072 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
PCCB-207ENST00000466072 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
PCCB-207ENST00000466072 RGPD3A6NKT7 1758 aaPredicted RBP23.54■■□□□ 1.36
PCCB-207ENST00000466072 RGPD4Q7Z3J3 1758 aa23.54■■□□□ 1.36
PCCB-207ENST00000466072 PRKAR2BP31323 418 aa23.53■■□□□ 1.36
PCCB-207ENST00000466072 C1orf141Q5JVX7 400 aa23.52■■□□□ 1.36
PCCB-207ENST00000466072 MYBBP1AQ9BQG0 1328 aaKnown RBP23.52■■□□□ 1.36
PCCB-207ENST00000466072 ITGB4P16144 1822 aa23.52■■□□□ 1.36
PCCB-207ENST00000466072 DCAF5Q96JK2 942 aa23.52■■□□□ 1.36
PCCB-207ENST00000466072 LGR6Q9HBX8 967 aa23.52■■□□□ 1.36
PCCB-207ENST00000466072 AKAP4Q5JQC9 854 aa23.5■■□□□ 1.35
PCCB-207ENST00000466072 TMOD3Q9NYL9 352 aa23.5■■□□□ 1.35
PCCB-207ENST00000466072 ASAP1Q9ULH1 1129 aa23.5■■□□□ 1.35
PCCB-207ENST00000466072 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
PCCB-207ENST00000466072 NBPF14Q5TI25 921 aa23.48■■□□□ 1.35
PCCB-207ENST00000466072 PDGFDQ9GZP0 370 aaPredicted RBP23.47■■□□□ 1.35
PCCB-207ENST00000466072 ERVV-2B6SEH9 535 aa23.47■■□□□ 1.35
PCCB-207ENST00000466072 FCHSD2O94868 740 aa23.47■■□□□ 1.35
PCCB-207ENST00000466072 ATG3Q9NT62 314 aa23.47■■□□□ 1.35
PCCB-207ENST00000466072 PALLDQ8WX93 1383 aa23.46■■□□□ 1.35
PCCB-207ENST00000466072 NFATC2IPQ8NCF5 419 aa23.46■■□□□ 1.35
PCCB-207ENST00000466072 CABP4P57796 275 aa23.45■■□□□ 1.34
PCCB-207ENST00000466072 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
PCCB-207ENST00000466072 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
PCCB-207ENST00000466072 RNMTO43148 476 aaKnown RBP23.45■■□□□ 1.34
PCCB-207ENST00000466072 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
PCCB-207ENST00000466072 LY75O60449 1722 aa23.44■■□□□ 1.34
PCCB-207ENST00000466072 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
PCCB-207ENST00000466072 SLC15A2Q16348 729 aa23.43■■□□□ 1.34
PCCB-207ENST00000466072 CCDC184Q52MB2 194 aa23.43■■□□□ 1.34
PCCB-207ENST00000466072 PLEKHF1Q96S99 279 aa23.43■■□□□ 1.34
PCCB-207ENST00000466072 PAPPAQ13219 1627 aa23.42■■□□□ 1.34
PCCB-207ENST00000466072 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
PCCB-207ENST00000466072 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
PCCB-207ENST00000466072 STK32BQ9NY57 414 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms