RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
GABRE-205ENST00000465405 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
GABRE-205ENST00000465405 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
GABRE-205ENST00000465405 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
GABRE-205ENST00000465405 MEGF6O75095 1541 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 CGNL1Q0VF96 1302 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 LRP5O75197 1615 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 PROM2Q8N271 834 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
GABRE-205ENST00000465405 PANK3Q9H999 370 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 INSRP06213 1382 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 FLT4P35916 1363 aa12.16□□□□□ -0.46
GABRE-205ENST00000465405 SHANK3Q9BYB0 1731 aa12.15□□□□□ -0.46
GABRE-205ENST00000465405 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
GABRE-205ENST00000465405 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
GABRE-205ENST00000465405 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
GABRE-205ENST00000465405 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
GABRE-205ENST00000465405 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
GABRE-205ENST00000465405 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
GABRE-205ENST00000465405 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
GABRE-205ENST00000465405 TNNT2P45379 298 aaPredicted RBP12.13□□□□□ -0.47
GABRE-205ENST00000465405 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
GABRE-205ENST00000465405 ZCRB1Q8TBF4 217 aaKnown RBP12.13□□□□□ -0.47
GABRE-205ENST00000465405 BTAF1O14981 1849 aa12.13□□□□□ -0.47
GABRE-205ENST00000465405 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
GABRE-205ENST00000465405 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
GABRE-205ENST00000465405 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
GABRE-205ENST00000465405 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
GABRE-205ENST00000465405 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
GABRE-205ENST00000465405 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
GABRE-205ENST00000465405 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
GABRE-205ENST00000465405 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
GABRE-205ENST00000465405 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
GABRE-205ENST00000465405 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
GABRE-205ENST00000465405 EYA1Q99502 592 aa12.09□□□□□ -0.47
GABRE-205ENST00000465405 NSD2O96028 1365 aa12.08□□□□□ -0.48
GABRE-205ENST00000465405 ABCB7O75027 752 aa12.08□□□□□ -0.48
GABRE-205ENST00000465405 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
GABRE-205ENST00000465405 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
GABRE-205ENST00000465405 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
GABRE-205ENST00000465405 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
GABRE-205ENST00000465405 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
GABRE-205ENST00000465405 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
GABRE-205ENST00000465405 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 CYP27B1O15528 508 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 KCNQ4P56696 695 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 MORC1Q86VD1 984 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
GABRE-205ENST00000465405 SPON1Q9HCB6 807 aa12.05□□□□□ -0.48
GABRE-205ENST00000465405 LY75O60449 1722 aa12.04□□□□□ -0.48
GABRE-205ENST00000465405 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
GABRE-205ENST00000465405 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
GABRE-205ENST00000465405 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
GABRE-205ENST00000465405 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
GABRE-205ENST00000465405 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
GABRE-205ENST00000465405 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
GABRE-205ENST00000465405 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
GABRE-205ENST00000465405 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
GABRE-205ENST00000465405 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
GABRE-205ENST00000465405 ITGB4P16144 1822 aa12.02□□□□□ -0.49
GABRE-205ENST00000465405 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
GABRE-205ENST00000465405 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
GABRE-205ENST00000465405 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
GABRE-205ENST00000465405 PTGER2P43116 358 aa12□□□□□ -0.49
GABRE-205ENST00000465405 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
GABRE-205ENST00000465405 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
GABRE-205ENST00000465405 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
GABRE-205ENST00000465405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.493e-10■■□□□ 11.6
GABRE-205ENST00000465405 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
GABRE-205ENST00000465405 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
GABRE-205ENST00000465405 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
GABRE-205ENST00000465405 PHKG2P15735 406 aa11.99□□□□□ -0.49
GABRE-205ENST00000465405 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
GABRE-205ENST00000465405 IL13P35225 146 aa11.98□□□□□ -0.49
GABRE-205ENST00000465405 MTHFSP49914 203 aa11.98□□□□□ -0.49
GABRE-205ENST00000465405 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
GABRE-205ENST00000465405 PIGBQ92521 554 aa11.98□□□□□ -0.49
GABRE-205ENST00000465405 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 C5P01031 1676 aa11.97□□□□□ -0.49
GABRE-205ENST00000465405 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
GABRE-205ENST00000465405 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
GABRE-205ENST00000465405 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
GABRE-205ENST00000465405 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
GABRE-205ENST00000465405 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
GABRE-205ENST00000465405 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
GABRE-205ENST00000465405 KDRP35968 1356 aa11.94□□□□□ -0.5
GABRE-205ENST00000465405 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
GABRE-205ENST00000465405 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
GABRE-205ENST00000465405 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
GABRE-205ENST00000465405 KDM6AO15550 1401 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms