RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
SSR3-203ENST00000464138 PATL2C9JE40 543 aaKnown RBP10.14□□□□□ -0.79
SSR3-203ENST00000464138 SLC19A1P41440 591 aa10.14□□□□□ -0.79
SSR3-203ENST00000464138 LIAT1Q6ZQX7 453 aa10.14□□□□□ -0.79
SSR3-203ENST00000464138 CDK15Q96Q40 435 aa10.14□□□□□ -0.79
SSR3-203ENST00000464138 NOVA2Q9UNW9 492 aaKnown RBP10.14□□□□□ -0.79
SSR3-203ENST00000464138 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L12C9JPN9 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L21D6R901 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 OXLD1Q5BKU9 147 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
SSR3-203ENST00000464138 WNT7AO00755 349 aa10.12□□□□□ -0.79
SSR3-203ENST00000464138 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
SSR3-203ENST00000464138 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
SSR3-203ENST00000464138 PTK7Q13308 1070 aa10.12□□□□□ -0.79
SSR3-203ENST00000464138 TSGA10IPQ3SY00 556 aa10.12□□□□□ -0.79
SSR3-203ENST00000464138 CRTC2Q53ET0 693 aaPredicted RBP10.12□□□□□ -0.79
SSR3-203ENST00000464138 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
SSR3-203ENST00000464138 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
SSR3-203ENST00000464138 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
SSR3-203ENST00000464138 BRD1O95696 1058 aa10.11□□□□□ -0.79
SSR3-203ENST00000464138 MYCP01106 439 aaPredicted RBP10.11□□□□□ -0.79
SSR3-203ENST00000464138 ARID5BQ14865 1188 aa10.11□□□□□ -0.79
SSR3-203ENST00000464138 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
SSR3-203ENST00000464138 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
SSR3-203ENST00000464138 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
SSR3-203ENST00000464138 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
SSR3-203ENST00000464138 RBM19Q9Y4C8 960 aaKnown RBP10.11□□□□□ -0.79
SSR3-203ENST00000464138 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
SSR3-203ENST00000464138 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
SSR3-203ENST00000464138 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
SSR3-203ENST00000464138 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
SSR3-203ENST00000464138 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
SSR3-203ENST00000464138 ZMIZ1Q9ULJ6 1067 aa10.1□□□□□ -0.79
SSR3-203ENST00000464138 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
SSR3-203ENST00000464138 EMID1Q96A84 441 aaPredicted RBP10.09□□□□□ -0.79
SSR3-203ENST00000464138 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.79
SSR3-203ENST00000464138 SIAH2O43255 324 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 RAB15P59190 212 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 GTF2IP78347 998 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 NR5A1Q13285 461 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
SSR3-203ENST00000464138 A0A0G2JS52 829 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 ERVH48-1M5A8F1 160 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 ADH1CP00326 375 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 FSHRP23945 695 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 GRM5P41594 1212 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 CLDN10P78369 228 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 KCNA1Q09470 495 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 SIX5Q8N196 739 aa10.07□□□□□ -0.8
SSR3-203ENST00000464138 ZNF598Q86UK7 904 aaKnown RBP10.06□□□□□ -0.8
SSR3-203ENST00000464138 STK32AQ8WU08 396 aa10.06□□□□□ -0.8
SSR3-203ENST00000464138 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
SSR3-203ENST00000464138 MRGPRX2Q96LB1 330 aa10.06□□□□□ -0.8
SSR3-203ENST00000464138 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
SSR3-203ENST00000464138 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
SSR3-203ENST00000464138 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
SSR3-203ENST00000464138 WDR97A6NE52 1622 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 PSME1Q06323 249 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 DPYDQ12882 1025 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 PCDHGA11Q9Y5H2 935 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
SSR3-203ENST00000464138 SEC13P55735 322 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 CC2D2BQ6DHV5 1058 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 CCDC116Q8IYX3 515 aa10.04□□□□□ -0.8
SSR3-203ENST00000464138 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
SSR3-203ENST00000464138 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
SSR3-203ENST00000464138 POLA1P09884 1462 aaPredicted RBP10.03□□□□□ -0.8
SSR3-203ENST00000464138 SYNJ1O43426 1573 aa10.02□□□□□ -0.81
SSR3-203ENST00000464138 MYT1Q01538 1121 aa10.01□□□□□ -0.81
SSR3-203ENST00000464138 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
SSR3-203ENST00000464138 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
SSR3-203ENST00000464138 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
SSR3-203ENST00000464138 EMILIN1Q9Y6C2 1016 aa10.01□□□□□ -0.81
SSR3-203ENST00000464138 CARNS1A5YM72 827 aa10□□□□□ -0.81
SSR3-203ENST00000464138 DKK1O94907 266 aa10□□□□□ -0.81
SSR3-203ENST00000464138 SCTRP47872 440 aa10□□□□□ -0.81
SSR3-203ENST00000464138 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
SSR3-203ENST00000464138 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
SSR3-203ENST00000464138 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
SSR3-203ENST00000464138 MAGI1Q96QZ7 1491 aaPredicted RBP9.99□□□□□ -0.81
SSR3-203ENST00000464138 M0R2N6 131 aa9.99□□□□□ -0.81
SSR3-203ENST00000464138 ALDH1A1P00352 501 aa9.99□□□□□ -0.81
SSR3-203ENST00000464138 CYP2U1Q7Z449 544 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms