RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 NR6A1Q15406 480 aa8.67□□□□□ -1.02
ITM2B-203ENST00000463839 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
ITM2B-203ENST00000463839 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
ITM2B-203ENST00000463839 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
ITM2B-203ENST00000463839 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
ITM2B-203ENST00000463839 PPP2R2DQ66LE6 453 aa8.66□□□□□ -1.02
ITM2B-203ENST00000463839 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
ITM2B-203ENST00000463839 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
ITM2B-203ENST00000463839 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
ITM2B-203ENST00000463839 PROCP04070 461 aa8.64□□□□□ -1.03
ITM2B-203ENST00000463839 BCRP11274 1271 aa8.64□□□□□ -1.03
ITM2B-203ENST00000463839 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
ITM2B-203ENST00000463839 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
ITM2B-203ENST00000463839 IGF1RP08069 1367 aa8.63□□□□□ -1.03
ITM2B-203ENST00000463839 GPC1P35052 558 aa8.63□□□□□ -1.03
ITM2B-203ENST00000463839 C14orf37Q86TY3 774 aa8.63□□□□□ -1.03
ITM2B-203ENST00000463839 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
ITM2B-203ENST00000463839 DBN1Q16643 649 aa8.62□□□□□ -1.03
ITM2B-203ENST00000463839 ERICH6Q7L0X2 663 aa8.62□□□□□ -1.03
ITM2B-203ENST00000463839 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
ITM2B-203ENST00000463839 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
ITM2B-203ENST00000463839 FOXR1Q6PIV2 292 aa8.61□□□□□ -1.03
ITM2B-203ENST00000463839 PRICKLE2Q7Z3G6 844 aa8.61□□□□□ -1.03
ITM2B-203ENST00000463839 ACDQ96AP0 544 aa8.61□□□□□ -1.03
ITM2B-203ENST00000463839 DYRK1BQ9Y463 629 aa8.61□□□□□ -1.03
ITM2B-203ENST00000463839 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
ITM2B-203ENST00000463839 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
ITM2B-203ENST00000463839 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
ITM2B-203ENST00000463839 ARXQ96QS3 562 aa8.59□□□□□ -1.03
ITM2B-203ENST00000463839 H7C1W4 665 aa8.58□□□□□ -1.04
ITM2B-203ENST00000463839 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
ITM2B-203ENST00000463839 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
ITM2B-203ENST00000463839 GPR25O00155 361 aa8.57□□□□□ -1.04
ITM2B-203ENST00000463839 RHOQP17081 205 aa8.57□□□□□ -1.04
ITM2B-203ENST00000463839 WDR44Q5JSH3 913 aa8.57□□□□□ -1.04
ITM2B-203ENST00000463839 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
ITM2B-203ENST00000463839 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 OIP5O43482 229 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 RAB15P59190 212 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
ITM2B-203ENST00000463839 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
ITM2B-203ENST00000463839 BRPF1P55201 1214 aaPredicted RBP8.55□□□□□ -1.04
ITM2B-203ENST00000463839 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
ITM2B-203ENST00000463839 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
ITM2B-203ENST00000463839 ALYREFQ86V81 257 aaKnown RBP8.54□□□□□ -1.04
ITM2B-203ENST00000463839 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
ITM2B-203ENST00000463839 GRIP2Q9C0E4 1043 aa8.54□□□□□ -1.04
ITM2B-203ENST00000463839 HMX1Q9NP08 348 aaPredicted RBP8.54□□□□□ -1.04
ITM2B-203ENST00000463839 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
ITM2B-203ENST00000463839 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
ITM2B-203ENST00000463839 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
ITM2B-203ENST00000463839 AP1G2O75843 785 aa8.53□□□□□ -1.04
ITM2B-203ENST00000463839 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
ITM2B-203ENST00000463839 MX2P20592 715 aa8.52□□□□□ -1.05
ITM2B-203ENST00000463839 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
ITM2B-203ENST00000463839 GALNT6Q8NCL4 622 aa8.52□□□□□ -1.05
ITM2B-203ENST00000463839 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
ITM2B-203ENST00000463839 USP17L8P0C7I0 530 aa8.51□□□□□ -1.05
ITM2B-203ENST00000463839 POU4F2Q12837 409 aa8.51□□□□□ -1.05
ITM2B-203ENST00000463839 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
ITM2B-203ENST00000463839 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
ITM2B-203ENST00000463839 KRBA1A5PL33 1030 aa8.5□□□□□ -1.05
ITM2B-203ENST00000463839 MEN1O00255 615 aa8.5□□□□□ -1.05
ITM2B-203ENST00000463839 MAP2K3P46734 347 aa8.5□□□□□ -1.05
ITM2B-203ENST00000463839 SNRPNP63162 240 aaKnown RBP8.5□□□□□ -1.05
ITM2B-203ENST00000463839 CLN3Q13286 438 aa8.5□□□□□ -1.05
ITM2B-203ENST00000463839 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
ITM2B-203ENST00000463839 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
ITM2B-203ENST00000463839 BAG6P46379 1132 aa8.49□□□□□ -1.05
ITM2B-203ENST00000463839 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
ITM2B-203ENST00000463839 GAS2L1Q99501 681 aaPredicted RBP8.49□□□□□ -1.05
ITM2B-203ENST00000463839 OXCT2Q9BYC2 517 aaPredicted RBP8.49□□□□□ -1.05
ITM2B-203ENST00000463839 TRIM34Q9BYJ4 488 aa8.49□□□□□ -1.05
ITM2B-203ENST00000463839 F11P03951 625 aa8.48□□□□□ -1.05
ITM2B-203ENST00000463839 CC2D2BQ6DHV5 1058 aa8.48□□□□□ -1.05
ITM2B-203ENST00000463839 THBS1P07996 1170 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 SLC27A3Q5K4L6 730 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
ITM2B-203ENST00000463839 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
ITM2B-203ENST00000463839 SHISA8B8ZZ34 492 aa8.46□□□□□ -1.06
ITM2B-203ENST00000463839 COL8A1P27658 744 aa8.46□□□□□ -1.06
ITM2B-203ENST00000463839 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 TRAK2O60296 914 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
ITM2B-203ENST00000463839 RNF20Q5VTR2 975 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 TAS1R3Q7RTX0 852 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 Q8N3U1 123 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 TIMMDC1Q9NPL8 285 aa8.45□□□□□ -1.06
ITM2B-203ENST00000463839 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
ITM2B-203ENST00000463839 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
ITM2B-203ENST00000463839 UBAP2LQ14157 1087 aaKnown RBP8.44□□□□□ -1.06
ITM2B-203ENST00000463839 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
ITM2B-203ENST00000463839 KLRG1Q96E93 195 aa8.44□□□□□ -1.06
ITM2B-203ENST00000463839 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms