RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
NUP58-206ENST00000463407 CT47A1Q5JQC4 288 aaPredicted RBP15.28■□□□□ 0.04
NUP58-206ENST00000463407 STK3Q13188 491 aa15.28■□□□□ 0.04
NUP58-206ENST00000463407 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
NUP58-206ENST00000463407 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
NUP58-206ENST00000463407 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
NUP58-206ENST00000463407 MPHOSPH10O00566 681 aaKnown RBP15.27■□□□□ 0.04
NUP58-206ENST00000463407 SOGA3Q5TF21 947 aa15.27■□□□□ 0.04
NUP58-206ENST00000463407 ZNF592Q92610 1267 aa15.27■□□□□ 0.04
NUP58-206ENST00000463407 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.04
NUP58-206ENST00000463407 TRMT112Q9UI30 125 aaKnown RBP15.27■□□□□ 0.04
NUP58-206ENST00000463407 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.04
NUP58-206ENST00000463407 TXLNAP40222 546 aa15.27■□□□□ 0.03
NUP58-206ENST00000463407 CYP46A1Q9Y6A2 500 aa15.27■□□□□ 0.03
NUP58-206ENST00000463407 SDF4Q9BRK5 362 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 KDM5BQ9UGL1 1544 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 TRIM22Q8IYM9 498 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 ACEP12821 1306 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 HSP90AB3PQ58FF7 597 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 ODF2Q5BJF6 829 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 ANKRD24Q8TF21 1146 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 AKAP2Q9Y2D5 859 aa15.26■□□□□ 0.03
NUP58-206ENST00000463407 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
NUP58-206ENST00000463407 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
NUP58-206ENST00000463407 C14orf93Q9H972 538 aaKnown RBP15.25■□□□□ 0.03
NUP58-206ENST00000463407 RABEP1Q15276 862 aa15.25■□□□□ 0.03
NUP58-206ENST00000463407 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
NUP58-206ENST00000463407 AIDAQ96BJ3 306 aa15.25■□□□□ 0.03
NUP58-206ENST00000463407 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
NUP58-206ENST00000463407 MCM2P49736 904 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 UBAC1Q9BSL1 405 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 USP5P45974 858 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 NUTM1Q86Y26 1132 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 ZNF396Q96N95 335 aaPredicted RBP15.24■□□□□ 0.03
NUP58-206ENST00000463407 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
NUP58-206ENST00000463407 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
NUP58-206ENST00000463407 C8orf37Q96NL8 207 aa15.24■□□□□ 0.03
NUP58-206ENST00000463407 NAT10Q9H0A0 1025 aaKnown RBP15.23■□□□□ 0.03
NUP58-206ENST00000463407 SCAF11Q99590 1463 aaKnown RBP15.23■□□□□ 0.03
NUP58-206ENST00000463407 CTNNA3Q9UI47 895 aa15.23■□□□□ 0.03
NUP58-206ENST00000463407 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
NUP58-206ENST00000463407 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
NUP58-206ENST00000463407 OFD1O75665 1012 aa15.23■□□□□ 0.03
NUP58-206ENST00000463407 GPTP24298 496 aa15.23■□□□□ 0.03
NUP58-206ENST00000463407 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
NUP58-206ENST00000463407 PLCH2O75038 1416 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 POLR3DP05423 398 aaPredicted RBP15.22■□□□□ 0.03
NUP58-206ENST00000463407 PDCP20941 246 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 ZFYVE27Q5T4F4 411 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
NUP58-206ENST00000463407 RFC4P35249 363 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
NUP58-206ENST00000463407 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 TTC21BQ7Z4L5 1316 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 STK38Q15208 465 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
NUP58-206ENST00000463407 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
NUP58-206ENST00000463407 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
NUP58-206ENST00000463407 WDR7Q9Y4E6 1490 aa15.21■□□□□ 0.03
NUP58-206ENST00000463407 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
NUP58-206ENST00000463407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.037e-7■■■■■ 107.1
NUP58-206ENST00000463407 DZIP1Q86YF9 867 aaKnown RBP15.21■□□□□ 0.03
NUP58-206ENST00000463407 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
NUP58-206ENST00000463407 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
NUP58-206ENST00000463407 PDILTQ8N807 584 aa15.21■□□□□ 0.03
NUP58-206ENST00000463407 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
NUP58-206ENST00000463407 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.02
NUP58-206ENST00000463407 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.02
NUP58-206ENST00000463407 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
NUP58-206ENST00000463407 ZNF76P36508 570 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 SLC5A1P13866 664 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 ACSBG1Q96GR2 724 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 ATP10BO94823 1461 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 HSPA2P54652 639 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 A2MP01023 1474 aa15.2■□□□□ 0.02
NUP58-206ENST00000463407 ZNF622Q969S3 477 aaKnown RBP eCLIP15.2■□□□□ 0.021e-7■□□□□ 9.3
NUP58-206ENST00000463407 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
NUP58-206ENST00000463407 MAGEC2Q9UBF1 373 aaPredicted RBP15.19■□□□□ 0.02
NUP58-206ENST00000463407 EXOC6BQ9Y2D4 811 aa15.19■□□□□ 0.02
NUP58-206ENST00000463407 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
NUP58-206ENST00000463407 KINO60870 393 aaKnown RBP15.19■□□□□ 0.02
NUP58-206ENST00000463407 C6orf229H3BNL8 230 aa15.19■□□□□ 0.02
NUP58-206ENST00000463407 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
NUP58-206ENST00000463407 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 ZNF287Q9HBT7 754 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 DNAAF4Q8WXU2 420 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
NUP58-206ENST00000463407 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
NUP58-206ENST00000463407 A0A087WZG4 1122 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 F6X3S4 739 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
NUP58-206ENST00000463407 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms