RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 ANKRD26Q9UPS8 1709 aa28.97■■■□□ 2.23
SPIN1-202ENST00000462844 SRCAPQ6ZRS2 3230 aa28.96■■■□□ 2.23
SPIN1-202ENST00000462844 POLKQ9UBT6 870 aa28.96■■■□□ 2.23
SPIN1-202ENST00000462844 KNSTRNQ9Y448 316 aa28.95■■■□□ 2.22
SPIN1-202ENST00000462844 USHBP1Q8N6Y0 703 aa28.93■■■□□ 2.22
SPIN1-202ENST00000462844 NCAPD2Q15021 1401 aa28.93■■■□□ 2.22
SPIN1-202ENST00000462844 RGPD2P0DJD1 1756 aa28.93■■■□□ 2.22
SPIN1-202ENST00000462844 PCDH11XQ9BZA7 1347 aa28.93■■■□□ 2.22
SPIN1-202ENST00000462844 PCDH11YQ9BZA8 1340 aa28.93■■■□□ 2.22
SPIN1-202ENST00000462844 STK32BQ9NY57 414 aa28.91■■■□□ 2.22
SPIN1-202ENST00000462844 PLEKHG2Q9H7P9 1386 aa28.9■■■□□ 2.22
SPIN1-202ENST00000462844 KIF7Q2M1P5 1343 aa28.9■■■□□ 2.22
SPIN1-202ENST00000462844 SLC27A3Q5K4L6 730 aa28.89■■■□□ 2.22
SPIN1-202ENST00000462844 MAP2P11137 1827 aaKnown RBP28.89■■■□□ 2.22
SPIN1-202ENST00000462844 HMGB2P26583 209 aaKnown RBP28.88■■■□□ 2.21
SPIN1-202ENST00000462844 MORC1Q86VD1 984 aa28.88■■■□□ 2.21
SPIN1-202ENST00000462844 SPON1Q9HCB6 807 aa28.88■■■□□ 2.21
SPIN1-202ENST00000462844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.88■■■□□ 2.21
SPIN1-202ENST00000462844 TNNT2P45379 298 aaPredicted RBP28.87■■■□□ 2.21
SPIN1-202ENST00000462844 PRIM1P49642 420 aaKnown RBP28.87■■■□□ 2.21
SPIN1-202ENST00000462844 ANO8Q9HCE9 1232 aaPredicted RBP28.87■■■□□ 2.21
SPIN1-202ENST00000462844 BTAF1O14981 1849 aa28.87■■■□□ 2.21
SPIN1-202ENST00000462844 SLC15A2Q16348 729 aa28.86■■■□□ 2.21
SPIN1-202ENST00000462844 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
SPIN1-202ENST00000462844 SYTL4Q96C24 671 aaPredicted RBP28.85■■■□□ 2.21
SPIN1-202ENST00000462844 EYA1Q99502 592 aa28.85■■■□□ 2.21
SPIN1-202ENST00000462844 SHANK3Q9BYB0 1731 aa28.84■■■□□ 2.21
SPIN1-202ENST00000462844 EIF4A2Q14240 407 aaKnown RBP28.82■■■□□ 2.2
SPIN1-202ENST00000462844 KAT6BQ8WYB5 2073 aa28.82■■■□□ 2.2
SPIN1-202ENST00000462844 AMER1Q5JTC6 1135 aaPredicted RBP28.8■■■□□ 2.2
SPIN1-202ENST00000462844 CYP27B1O15528 508 aa28.79■■■□□ 2.2
SPIN1-202ENST00000462844 DOT1LQ8TEK3 1739 aa28.79■■■□□ 2.2
SPIN1-202ENST00000462844 NKX1-1Q15270 411 aaPredicted RBP28.78■■■□□ 2.2
SPIN1-202ENST00000462844 PKD1L3Q7Z443 1732 aa28.77■■■□□ 2.2
SPIN1-202ENST00000462844 IGSF1Q8N6C5 1336 aa28.77■■■□□ 2.2
SPIN1-202ENST00000462844 LRRC4BQ9NT99 713 aa28.76■■■□□ 2.19
SPIN1-202ENST00000462844 PER1O15534 1290 aaPredicted RBP28.75■■■□□ 2.19
SPIN1-202ENST00000462844 PPP1R1BQ9UD71 204 aaPredicted RBP28.75■■■□□ 2.19
SPIN1-202ENST00000462844 PAPPAQ13219 1627 aa28.75■■■□□ 2.19
SPIN1-202ENST00000462844 CASZ1Q86V15 1759 aa28.75■■■□□ 2.19
SPIN1-202ENST00000462844 IFNL2Q8IZJ0 200 aa28.73■■■□□ 2.19
SPIN1-202ENST00000462844 NPC1L1Q9UHC9 1359 aa28.73■■■□□ 2.19
SPIN1-202ENST00000462844 SMARCC1Q92922 1105 aaPredicted RBP28.72■■■□□ 2.19
SPIN1-202ENST00000462844 AKT1S1Q96B36 256 aa28.71■■■□□ 2.19
SPIN1-202ENST00000462844 MTFR1LQ9H019 292 aa28.71■■■□□ 2.19
SPIN1-202ENST00000462844 CCNL1Q9UK58 526 aaPredicted RBP28.7■■■□□ 2.18
SPIN1-202ENST00000462844 AMOTQ4VCS5 1084 aa28.69■■■□□ 2.18
SPIN1-202ENST00000462844 SLC16A10Q8TF71 515 aa28.69■■■□□ 2.18
SPIN1-202ENST00000462844 LY75O60449 1722 aa28.69■■■□□ 2.18
SPIN1-202ENST00000462844 MPRIPQ6WCQ1 1025 aa28.68■■■□□ 2.18
SPIN1-202ENST00000462844 HSP90AB1P08238 724 aaKnown RBP28.67■■■□□ 2.18
SPIN1-202ENST00000462844 PHKG2P15735 406 aa28.67■■■□□ 2.18
SPIN1-202ENST00000462844 PLEKHO1Q53GL0 409 aaPredicted RBP28.67■■■□□ 2.18
SPIN1-202ENST00000462844 ZBTB7AO95365 584 aa28.66■■■□□ 2.18
SPIN1-202ENST00000462844 ZNF827Q17R98 1081 aa28.66■■■□□ 2.18
SPIN1-202ENST00000462844 PDGFDQ9GZP0 370 aaPredicted RBP28.66■■■□□ 2.18
SPIN1-202ENST00000462844 TFCP2L1Q9NZI6 479 aa28.65■■■□□ 2.18
SPIN1-202ENST00000462844 PALLDQ8WX93 1383 aa28.64■■■□□ 2.18
SPIN1-202ENST00000462844 PTGER2P43116 358 aa28.63■■■□□ 2.17
SPIN1-202ENST00000462844 TMOD3Q9NYL9 352 aa28.63■■■□□ 2.17
SPIN1-202ENST00000462844 IL13P35225 146 aa28.62■■■□□ 2.17
SPIN1-202ENST00000462844 MTHFSP49914 203 aa28.62■■■□□ 2.17
SPIN1-202ENST00000462844 PIGBQ92521 554 aa28.62■■■□□ 2.17
SPIN1-202ENST00000462844 KDRP35968 1356 aa28.62■■■□□ 2.17
SPIN1-202ENST00000462844 QSER1Q2KHR3 1735 aa28.61■■■□□ 2.17
SPIN1-202ENST00000462844 DCAF5Q96JK2 942 aa28.61■■■□□ 2.17
SPIN1-202ENST00000462844 ATF5Q9Y2D1 282 aaPredicted RBP28.61■■■□□ 2.17
SPIN1-202ENST00000462844 ERVV-2B6SEH9 535 aa28.6■■■□□ 2.17
SPIN1-202ENST00000462844 CC2D1BQ5T0F9 858 aaKnown RBP28.6■■■□□ 2.17
SPIN1-202ENST00000462844 DCAF8L1A6NGE4 600 aa28.59■■■□□ 2.17
SPIN1-202ENST00000462844 KCNQ4P56696 695 aa28.58■■■□□ 2.17
SPIN1-202ENST00000462844 SULT6B1Q6IMI4 303 aa28.58■■■□□ 2.17
SPIN1-202ENST00000462844 FLAD1Q8NFF5 587 aa28.58■■■□□ 2.17
SPIN1-202ENST00000462844 SGIP1Q9BQI5 828 aa28.58■■■□□ 2.17
SPIN1-202ENST00000462844 PNPLA7Q6ZV29 1317 aa28.58■■■□□ 2.17
SPIN1-202ENST00000462844 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
SPIN1-202ENST00000462844 ITGB4P16144 1822 aa28.57■■■□□ 2.16
SPIN1-202ENST00000462844 C1orf141Q5JVX7 400 aa28.56■■■□□ 2.16
SPIN1-202ENST00000462844 ZNF530Q6P9A1 599 aaPredicted RBP28.56■■■□□ 2.16
SPIN1-202ENST00000462844 DIAPH1O60610 1272 aaKnown RBP28.54■■■□□ 2.16
SPIN1-202ENST00000462844 AEBP1Q8IUX7 1158 aa28.53■■■□□ 2.16
SPIN1-202ENST00000462844 POLD1P28340 1107 aa28.52■■■□□ 2.16
SPIN1-202ENST00000462844 ARXQ96QS3 562 aa28.52■■■□□ 2.16
SPIN1-202ENST00000462844 LOC102724428A0A0B4J2F2 783 aa28.51■■■□□ 2.15
SPIN1-202ENST00000462844 SIK1P57059 783 aa28.51■■■□□ 2.15
SPIN1-202ENST00000462844 C5P01031 1676 aa28.5■■■□□ 2.15
SPIN1-202ENST00000462844 MAP3K5Q99683 1374 aa28.5■■■□□ 2.15
SPIN1-202ENST00000462844 ASAP1Q9ULH1 1129 aa28.49■■■□□ 2.15
SPIN1-202ENST00000462844 AK7Q96M32 723 aa28.48■■■□□ 2.15
SPIN1-202ENST00000462844 CABP4P57796 275 aa28.47■■■□□ 2.15
SPIN1-202ENST00000462844 AKAP4Q5JQC9 854 aa28.47■■■□□ 2.15
SPIN1-202ENST00000462844 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
SPIN1-202ENST00000462844 SYT17Q9BSW7 474 aa28.46■■■□□ 2.15
SPIN1-202ENST00000462844 FHDC1Q9C0D6 1143 aaPredicted RBP28.46■■■□□ 2.15
SPIN1-202ENST00000462844 MSH5O43196 834 aa28.45■■■□□ 2.14
SPIN1-202ENST00000462844 COL23A1Q86Y22 540 aaPredicted RBP28.45■■■□□ 2.14
SPIN1-202ENST00000462844 CFAP53Q96M91 514 aa28.45■■■□□ 2.14
SPIN1-202ENST00000462844 KDM6AO15550 1401 aaPredicted RBP28.44■■■□□ 2.14
SPIN1-202ENST00000462844 TAF1LQ8IZX4 1826 aa28.44■■■□□ 2.14
SPIN1-202ENST00000462844 ATP6V1AP38606 617 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms