RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.17
RTF1-202ENST00000462276 POTEAQ6S8J7 498 aa14.02□□□□□ -0.17
RTF1-202ENST00000462276 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
RTF1-202ENST00000462276 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.17
RTF1-202ENST00000462276 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
RTF1-202ENST00000462276 ZNF772Q68DY9 489 aaPredicted RBP14.01□□□□□ -0.17
RTF1-202ENST00000462276 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
RTF1-202ENST00000462276 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
RTF1-202ENST00000462276 RGPD1P0DJD0 1748 aa14.01□□□□□ -0.17
RTF1-202ENST00000462276 AFF2P51816 1311 aa14□□□□□ -0.17
RTF1-202ENST00000462276 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
RTF1-202ENST00000462276 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
RTF1-202ENST00000462276 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
RTF1-202ENST00000462276 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
RTF1-202ENST00000462276 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
RTF1-202ENST00000462276 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
RTF1-202ENST00000462276 ZCRB1Q8TBF4 217 aaKnown RBP13.99□□□□□ -0.17
RTF1-202ENST00000462276 RTF1Q92541 710 aaKnown RBP13.99□□□□□ -0.17
RTF1-202ENST00000462276 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
RTF1-202ENST00000462276 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
RTF1-202ENST00000462276 ZNF521Q96K83 1311 aa13.98□□□□□ -0.17
RTF1-202ENST00000462276 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
RTF1-202ENST00000462276 IL16Q14005 1332 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 EXOC5O00471 708 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
RTF1-202ENST00000462276 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
RTF1-202ENST00000462276 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 NWD2Q9ULI1 1742 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
RTF1-202ENST00000462276 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
RTF1-202ENST00000462276 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
RTF1-202ENST00000462276 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.17
RTF1-202ENST00000462276 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
RTF1-202ENST00000462276 RRP7AQ9Y3A4 280 aaKnown RBP13.96□□□□□ -0.17
RTF1-202ENST00000462276 E9PSI1 815 aa13.95□□□□□ -0.18
RTF1-202ENST00000462276 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
RTF1-202ENST00000462276 DISP2A7MBM2 1401 aa13.95□□□□□ -0.18
RTF1-202ENST00000462276 ATRNO75882 1429 aa13.95□□□□□ -0.18
RTF1-202ENST00000462276 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
RTF1-202ENST00000462276 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
RTF1-202ENST00000462276 PHKG2P15735 406 aa13.94□□□□□ -0.18
RTF1-202ENST00000462276 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
RTF1-202ENST00000462276 DCAF5Q96JK2 942 aa13.94□□□□□ -0.18
RTF1-202ENST00000462276 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
RTF1-202ENST00000462276 MEGF6O75095 1541 aa13.94□□□□□ -0.18
RTF1-202ENST00000462276 MSH5O43196 834 aa13.93□□□□□ -0.18
RTF1-202ENST00000462276 DDB1Q16531 1140 aa13.93□□□□□ -0.18
RTF1-202ENST00000462276 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
RTF1-202ENST00000462276 CYP27B1O15528 508 aa13.92□□□□□ -0.18
RTF1-202ENST00000462276 GNAI1P63096 354 aa13.92□□□□□ -0.18
RTF1-202ENST00000462276 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
RTF1-202ENST00000462276 IFT57Q9NWB7 429 aa13.92□□□□□ -0.18
RTF1-202ENST00000462276 SLFN5Q08AF3 891 aa13.91□□□□□ -0.18
RTF1-202ENST00000462276 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
RTF1-202ENST00000462276 IL17REQ8NFR9 667 aa13.91□□□□□ -0.18
RTF1-202ENST00000462276 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
RTF1-202ENST00000462276 CEMIPQ8WUJ3 1361 aa13.91□□□□□ -0.18
RTF1-202ENST00000462276 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
RTF1-202ENST00000462276 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
RTF1-202ENST00000462276 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
RTF1-202ENST00000462276 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
RTF1-202ENST00000462276 TRMT2AQ8IZ69 625 aaKnown RBP13.9□□□□□ -0.18
RTF1-202ENST00000462276 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
RTF1-202ENST00000462276 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
RTF1-202ENST00000462276 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
RTF1-202ENST00000462276 TEFQ10587 303 aa13.89□□□□□ -0.19
RTF1-202ENST00000462276 MCM10Q7L590 875 aa13.89□□□□□ -0.19
RTF1-202ENST00000462276 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.88□□□□□ -0.19
RTF1-202ENST00000462276 CHL1O00533 1208 aa13.88□□□□□ -0.19
RTF1-202ENST00000462276 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
RTF1-202ENST00000462276 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
RTF1-202ENST00000462276 TNS2Q63HR2 1409 aa13.88□□□□□ -0.19
RTF1-202ENST00000462276 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
RTF1-202ENST00000462276 RXRBP28702 533 aa13.87□□□□□ -0.19
RTF1-202ENST00000462276 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
RTF1-202ENST00000462276 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 A0A0G2JS52 829 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 MYT1Q01538 1121 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 SEPT12Q8IYM1 358 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
RTF1-202ENST00000462276 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
RTF1-202ENST00000462276 CABP4P57796 275 aa13.85□□□□□ -0.19
RTF1-202ENST00000462276 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
RTF1-202ENST00000462276 SOS1Q07889 1333 aaPredicted RBP13.85□□□□□ -0.19
RTF1-202ENST00000462276 BCL9O00512 1426 aa13.84□□□□□ -0.19
RTF1-202ENST00000462276 MARCH10Q8NA82 808 aaPredicted RBP13.84□□□□□ -0.19
RTF1-202ENST00000462276 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
RTF1-202ENST00000462276 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
RTF1-202ENST00000462276 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.19
RTF1-202ENST00000462276 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
RTF1-202ENST00000462276 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
RTF1-202ENST00000462276 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
RTF1-202ENST00000462276 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
RTF1-202ENST00000462276 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms