RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
VPS8-215ENST00000460158 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
VPS8-215ENST00000460158 CEP126Q9P2H0 1117 aa6.52□□□□□ -1.37
VPS8-215ENST00000460158 UCN2Q96RP3 112 aa6.51□□□□□ -1.37
VPS8-215ENST00000460158 KCTD15Q96SI1 283 aaPredicted RBP6.51□□□□□ -1.37
VPS8-215ENST00000460158 SERPINA10Q9UK55 444 aa6.51□□□□□ -1.37
VPS8-215ENST00000460158 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
VPS8-215ENST00000460158 MCCD1P59942 119 aaPredicted RBP6.5□□□□□ -1.37
VPS8-215ENST00000460158 KRT76Q01546 638 aa6.5□□□□□ -1.37
VPS8-215ENST00000460158 CBLBQ13191 982 aa6.5□□□□□ -1.37
VPS8-215ENST00000460158 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
VPS8-215ENST00000460158 GIGYF1O75420 1035 aaPredicted RBP6.49□□□□□ -1.37
VPS8-215ENST00000460158 TBC1D9Q6ZT07 1266 aa6.49□□□□□ -1.37
VPS8-215ENST00000460158 CCDC155Q8N6L0 562 aa6.49□□□□□ -1.37
VPS8-215ENST00000460158 ZNF592Q92610 1267 aa6.49□□□□□ -1.37
VPS8-215ENST00000460158 CNTNAP3BQ96NU0 1288 aa6.49□□□□□ -1.37
VPS8-215ENST00000460158 CNTNAP3Q9BZ76 1288 aa6.49□□□□□ -1.37
VPS8-215ENST00000460158 SLC35F4A4IF30 521 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
VPS8-215ENST00000460158 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 RNF225M0QZC1 329 aaPredicted RBP6.48□□□□□ -1.37
VPS8-215ENST00000460158 GSK3AP49840 483 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 SLFNL1Q499Z3 407 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 PHTF2Q8N3S3 785 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
VPS8-215ENST00000460158 PPP1R12CQ9BZL4 782 aa6.48□□□□□ -1.37
VPS8-215ENST00000460158 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
VPS8-215ENST00000460158 NBPF20Q3BBV1 942 aa6.47□□□□□ -1.37
VPS8-215ENST00000460158 TSGA10IPQ3SY00 556 aa6.47□□□□□ -1.37
VPS8-215ENST00000460158 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
VPS8-215ENST00000460158 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
VPS8-215ENST00000460158 ESPNB1AK53 854 aa6.46□□□□□ -1.38
VPS8-215ENST00000460158 ITGA6P23229 1130 aa6.46□□□□□ -1.38
VPS8-215ENST00000460158 RNF135Q8IUD6 432 aa6.46□□□□□ -1.38
VPS8-215ENST00000460158 ADAMTS8Q9UP79 889 aa6.46□□□□□ -1.38
VPS8-215ENST00000460158 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 ATP9BO43861 1147 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 SKIP12755 728 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 RFX1P22670 979 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 LMOD1P29536 600 aaPredicted RBP6.45□□□□□ -1.38
VPS8-215ENST00000460158 RAB15P59190 212 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 TMEM151AQ8N4L1 468 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 NFATC2IPQ8NCF5 419 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
VPS8-215ENST00000460158 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
VPS8-215ENST00000460158 MAFBQ9Y5Q3 323 aaPredicted RBP6.45□□□□□ -1.38
VPS8-215ENST00000460158 SLURP2P0DP57 97 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 CTSOP43234 321 aaPredicted RBP6.44□□□□□ -1.38
VPS8-215ENST00000460158 RELBQ01201 579 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 RASSF7Q02833 373 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 RNFT1Q5M7Z0 435 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 ZNF385CQ66K41 422 aaPredicted RBP6.44□□□□□ -1.38
VPS8-215ENST00000460158 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 PLPP7Q8NBV4 271 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 INSM2Q96T92 566 aaPredicted RBP6.44□□□□□ -1.38
VPS8-215ENST00000460158 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
VPS8-215ENST00000460158 USP17L5A8MUK1 530 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 GDF11O95390 407 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 ADH1AP07327 375 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 RNF20Q5VTR2 975 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 SEPT12Q8IYM1 358 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 DEPDC4Q8N2C3 294 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 VWA5B2Q8N398 1253 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 KCTD17Q8N5Z5 321 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 RNF217Q8TC41 542 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 TRIM52Q96A61 297 aa6.43□□□□□ -1.38
VPS8-215ENST00000460158 CDCA7Q9BWT1 371 aaPredicted RBP6.43□□□□□ -1.38
VPS8-215ENST00000460158 POLMQ9NP87 494 aaPredicted RBP6.43□□□□□ -1.38
VPS8-215ENST00000460158 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.42□□□□□ -1.38
VPS8-215ENST00000460158 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 ERVH48-1M5A8F1 160 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 DOLKQ9UPQ8 538 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 PCDHB11Q9Y5F2 797 aa6.42□□□□□ -1.38
VPS8-215ENST00000460158 SENP3-EIF4A1A0A087X0R7 540 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 CDC14CA4D256 554 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 LILRA1O75019 489 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 ARHGEF15O94989 841 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 SRPK2P78362 688 aaKnown RBP6.41□□□□□ -1.38
VPS8-215ENST00000460158 NCOA4Q13772 614 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 SUZ12Q15022 739 aaKnown RBP6.41□□□□□ -1.38
VPS8-215ENST00000460158 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 PLEKHM2Q8IWE5 1019 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 ZNF784Q8NCA9 323 aaPredicted RBP6.41□□□□□ -1.38
VPS8-215ENST00000460158 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
VPS8-215ENST00000460158 TMPRSS4Q9NRS4 437 aa6.41□□□□□ -1.38
VPS8-215ENST00000460158 PTGIRP43119 386 aa6.4□□□□□ -1.38
VPS8-215ENST00000460158 OXLD1Q5BKU9 147 aa6.4□□□□□ -1.38
VPS8-215ENST00000460158 ADD1P35611 737 aaKnown RBP6.39□□□□□ -1.39
VPS8-215ENST00000460158 EML3Q32P44 896 aa6.39□□□□□ -1.39
VPS8-215ENST00000460158 KANK4Q5T7N3 995 aaPredicted RBP6.39□□□□□ -1.39
VPS8-215ENST00000460158 FOXD4L5Q5VV16 416 aaPredicted RBP6.39□□□□□ -1.39
VPS8-215ENST00000460158 CCDC125Q86Z20 511 aa6.39□□□□□ -1.39
VPS8-215ENST00000460158 KDF1Q8NAX2 398 aaPredicted RBP6.39□□□□□ -1.39
VPS8-215ENST00000460158 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms