RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 NSD2O96028 1365 aa12.81□□□□□ -0.36
AMBRA1-202ENST00000458649 MYL6BP14649 208 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 CHMP5Q9NZZ3 219 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 AK7Q96M32 723 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 NME9Q86XW9 330 aa12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
AMBRA1-202ENST00000458649 ABCC11Q96J66 1382 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 BECN2A8MW95 431 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 PZPP20742 1482 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 MRE11P49959 708 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 ZNF287Q9HBT7 754 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 BACH2Q9BYV9 841 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 SMC3Q9UQE7 1217 aa12.79□□□□□ -0.36
AMBRA1-202ENST00000458649 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 BICDL1Q6ZP65 573 aa12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 ARGLU1Q9NWB6 273 aaPredicted RBP12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-202ENST00000458649 ARHGEF12Q9NZN5 1544 aa12.77□□□□□ -0.36
AMBRA1-202ENST00000458649 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.36
AMBRA1-202ENST00000458649 RDXP35241 583 aaKnown RBP12.77□□□□□ -0.36
AMBRA1-202ENST00000458649 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.36
AMBRA1-202ENST00000458649 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 RARSP54136 660 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 TESK2Q96S53 571 aa12.77□□□□□ -0.37
AMBRA1-202ENST00000458649 NFKBIBQ15653 356 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 EMILIN1Q9Y6C2 1016 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
AMBRA1-202ENST00000458649 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 THUMPD2Q9BTF0 503 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
AMBRA1-202ENST00000458649 LMTK3Q96Q04 1460 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 TXLNAP40222 546 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
AMBRA1-202ENST00000458649 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 ANKRD36BQ8N2N9 1353 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 NUCB2P80303 420 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 RIMS2Q9UQ26 1411 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 H0YHG0 523 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 MCM2P49736 904 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
AMBRA1-202ENST00000458649 PDCP20941 246 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 ZMYND15Q9H091 742 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
AMBRA1-202ENST00000458649 RFC4P35249 363 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms