RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 GRXCR2A6NFK2 248 aa3.31□□□□□ -1.88
NEDD1-204ENST00000457368 PTPREP23469 700 aa3.31□□□□□ -1.88
NEDD1-204ENST00000457368 EZH2Q15910 746 aaKnown RBP3.31□□□□□ -1.88
NEDD1-204ENST00000457368 NBPF8Q3BBV2 869 aa3.31□□□□□ -1.88
NEDD1-204ENST00000457368 NBPF14Q5TI25 921 aa3.31□□□□□ -1.88
NEDD1-204ENST00000457368 SRCAPQ6ZRS2 3230 aa3.31□□□□□ -1.88
NEDD1-204ENST00000457368 MAP3K7O43318 606 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 FOXO3O43524 673 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 PBX2P40425 430 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 PSME1Q06323 249 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 VSIG10Q8N0Z9 540 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 PTCD2Q8WV60 388 aaKnown RBP3.3□□□□□ -1.88
NEDD1-204ENST00000457368 PLCH1Q4KWH8 1693 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 NRXN1Q9ULB1 1477 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 ESCO1Q5FWF5 840 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 NUP188Q5SRE5 1749 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 RGPD3A6NKT7 1758 aaPredicted RBP3.3□□□□□ -1.88
NEDD1-204ENST00000457368 RGPD4Q7Z3J3 1758 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 FAM83GA6ND36 823 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 GTPBP6O43824 516 aaPredicted RBP3.3□□□□□ -1.88
NEDD1-204ENST00000457368 PDE4AP27815 886 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 BARGINQ6ZT62 677 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 KRT28Q7Z3Y7 464 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 EMILIN3Q9NT22 766 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 VPS9D1Q9Y2B5 631 aa3.3□□□□□ -1.88
NEDD1-204ENST00000457368 BCL9O00512 1426 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 COL14A1Q05707 1796 aaKnown RBP3.29□□□□□ -1.88
NEDD1-204ENST00000457368 PLCB2Q00722 1185 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 ABCA3Q99758 1704 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 FMN2Q9NZ56 1722 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 ANKARQ7Z5J8 1434 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 PLSCR1O15162 318 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 FAM98CQ17RN3 349 aaKnown RBP3.29□□□□□ -1.88
NEDD1-204ENST00000457368 ZDHHC16Q969W1 377 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 NBPF3Q9H094 633 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 CHIC2Q9UKJ5 165 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 SPATA31A1Q5TZJ5 1347 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 CASZ1Q86V15 1759 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 NUP155O75694 1391 aa3.29□□□□□ -1.88
NEDD1-204ENST00000457368 PPP1R1BQ9UD71 204 aaPredicted RBP3.28□□□□□ -1.88
NEDD1-204ENST00000457368 KNDC1Q76NI1 1749 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 PAXIP1Q6ZW49 1069 aaPredicted RBP3.28□□□□□ -1.88
NEDD1-204ENST00000457368 OXER1Q8TDS5 423 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 CRISPLD2Q9H0B8 497 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 WBP1LQ9NX94 342 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 AATKQ6ZMQ8 1374 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 CLTCL1P53675 1640 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 APBA3O96018 575 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 COL9A1P20849 921 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 NBR1Q14596 966 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 TSR1Q2NL82 804 aaKnown RBP3.28□□□□□ -1.88
NEDD1-204ENST00000457368 EP400Q96L91 3159 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 PCDHGA10Q9Y5H3 936 aa3.28□□□□□ -1.88
NEDD1-204ENST00000457368 NRKQ7Z2Y5 1582 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 DLC1Q96QB1 1528 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 FOSBP53539 338 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 ZNF326Q5BKZ1 582 aaKnown RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 BTG4Q9NY30 223 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 CCDC9Q9Y3X0 531 aaKnown RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 DHX57Q6P158 1386 aaKnown RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 GIGYF1O75420 1035 aaPredicted RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 TRIM37O94972 964 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 XPCQ01831 940 aaPredicted RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 THSD4Q6ZMP0 1018 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 Q6ZNB5 142 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 ANKK1Q8NFD2 765 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 SYT17Q9BSW7 474 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 KIAA1468Q9P260 1216 aa3.27□□□□□ -1.89
NEDD1-204ENST00000457368 THRAP3Q9Y2W1 955 aaKnown RBP3.27□□□□□ -1.89
NEDD1-204ENST00000457368 TRPM3Q9HCF6 1732 aaPredicted RBP3.26□□□□□ -1.89
NEDD1-204ENST00000457368 BCL2L12Q9HB09 334 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 RYDENQ9NUL5 291 aaKnown RBP3.26□□□□□ -1.89
NEDD1-204ENST00000457368 ALS2Q96Q42 1657 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 CRYBG1Q9Y4K1 1723 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 EIF3AQ14152 1382 aaKnown RBP3.26□□□□□ -1.89
NEDD1-204ENST00000457368 ANKRD30BQ9BXX2 1392 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 CAMTA1Q9Y6Y1 1673 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 CABLES1Q8TDN4 633 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 CPDO75976 1380 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 PLEKHH1Q9ULM0 1364 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 HRO43593 1189 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 HAP1P54257 671 aaPredicted RBP3.26□□□□□ -1.89
NEDD1-204ENST00000457368 ZBED2Q9BTP6 218 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 MTFR1LQ9H019 292 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 PEAK1Q9H792 1746 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 ATP7BP35670 1465 aa3.26□□□□□ -1.89
NEDD1-204ENST00000457368 CHD4Q14839 1912 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 ZFRQ96KR1 1074 aaKnown RBP3.25□□□□□ -1.89
NEDD1-204ENST00000457368 MYOM1P52179 1685 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 PIK3C2GO75747 1445 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 SSH2Q76I76 1423 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 YTHDC2Q9H6S0 1430 aaKnown RBP3.25□□□□□ -1.89
NEDD1-204ENST00000457368 SHANK3Q9BYB0 1731 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 A0A0G2JS52 829 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 HSPA6P17066 643 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 MYT1Q01538 1121 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 ERICH6Q7L0X2 663 aa3.25□□□□□ -1.89
NEDD1-204ENST00000457368 FHDC1Q9C0D6 1143 aaPredicted RBP3.25□□□□□ -1.89
NEDD1-204ENST00000457368 ANO8Q9HCE9 1232 aaPredicted RBP3.25□□□□□ -1.89
NEDD1-204ENST00000457368 OVOS2A0A0G2JMS6 1433 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms