RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 GDPD2Q9HCC8 539 aa10.43□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 RNF144AP50876 292 aaPredicted RBP10.42□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 A0A1W2PRU2 124 aa10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 MEN1O00255 615 aa10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 CCDC85AQ96PX6 553 aaPredicted RBP10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 OSBPL3Q9H4L5 887 aa10.41□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 TRAK2O60296 914 aa10.4□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 ITGA6P23229 1130 aa10.4□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 VAC14Q08AM6 782 aa10.4□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 MCM6Q14566 821 aa10.4□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 PRICKLE2Q7Z3G6 844 aa10.4□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 ABL2P42684 1182 aa10.39□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 EIF4G2P78344 907 aaKnown RBP eCLIP10.39□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CYP2U1Q7Z449 544 aa10.39□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 RHOQP17081 205 aa10.38□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 KRT76Q01546 638 aa10.38□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 GPC1P35052 558 aa10.37□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 TSGA10IPQ3SY00 556 aa10.37□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 VWA5B2Q8N398 1253 aa10.37□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 PHTF2Q8N3S3 785 aa10.37□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CLN3Q13286 438 aa10.36□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CDC14CA4D256 554 aa10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CNTNAP3BQ96NU0 1288 aa10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 CNTNAP3Q9BZ76 1288 aa10.35□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 RAB6BQ9NRW1 208 aa10.34□□□□□ -0.75
PCDH9-AS4-201ENST00000456459 SLFNL1Q499Z3 407 aa10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 SLC27A3Q5K4L6 730 aa10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 RNFT1Q5M7Z0 435 aa10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 MYCP01106 439 aaPredicted RBP10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 GNRH1P01148 92 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 POU4F2Q12837 409 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 IL2RAP01589 272 aa10.31□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 ESYT1Q9BSJ8 1104 aa10.29□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 CENPCQ03188 943 aa10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 USP4Q13107 963 aa10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 OXLD1Q5BKU9 147 aa10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 NBPF10Q6P3W6 841 aaKnown RBP10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 HRH3Q9Y5N1 445 aa10.28□□□□□ -0.76
PCDH9-AS4-201ENST00000456459 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 DYRK1BQ9Y463 629 aa10.27□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 XAGE2Q96GT9 111 aa10.26□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 SOX11P35716 441 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 DBN1Q16643 649 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 WDR44Q5JSH3 913 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 RIPOR1Q6ZS17 1223 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 TAS1R3Q7RTX0 852 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 WASLO00401 505 aaPredicted RBP10.24□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 PLPP7Q8NBV4 271 aa10.24□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 GAS6Q14393 721 aa10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 ETNK1Q9HBU6 452 aa10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 SLURP2P0DP57 97 aa10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 ZNF385CQ66K41 422 aaPredicted RBP10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 WHAMMQ8TF30 809 aa10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 SIRT1Q96EB6 747 aa10.22□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 GPR25O00155 361 aa10.21□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 PHKA2P46019 1235 aa10.21□□□□□ -0.77
PCDH9-AS4-201ENST00000456459 SCNN1DP51172 638 aa10.2□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 ALG2Q9H553 416 aa10.2□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 H7C1W4 665 aa10.19□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 F11P03951 625 aa10.19□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 FLIIQ13045 1269 aa10.19□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 TMEM214Q6NUQ4 689 aaKnown RBP10.19□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 RAD21O60216 631 aa10.18□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 C4orf17Q53FE4 359 aa10.18□□□□□ -0.78
PCDH9-AS4-201ENST00000456459 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms