RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
DEPDC1B-202ENST00000453022 SYT17Q9BSW7 474 aa12.47□□□□□ -0.41
DEPDC1B-202ENST00000453022 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.41
DEPDC1B-202ENST00000453022 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.42
DEPDC1B-202ENST00000453022 COG3Q96JB2 828 aa12.46□□□□□ -0.42
DEPDC1B-202ENST00000453022 C5P01031 1676 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
DEPDC1B-202ENST00000453022 ITGB4P16144 1822 aa12.44□□□□□ -0.42
DEPDC1B-202ENST00000453022 KCNQ4P56696 695 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 ARXQ96QS3 562 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 PKD1L3Q7Z443 1732 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 USP47Q96K76 1375 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 AMPHP49418 695 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
DEPDC1B-202ENST00000453022 FYB1O15117 783 aa12.42□□□□□ -0.42
DEPDC1B-202ENST00000453022 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
DEPDC1B-202ENST00000453022 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
DEPDC1B-202ENST00000453022 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
DEPDC1B-202ENST00000453022 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
DEPDC1B-202ENST00000453022 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
DEPDC1B-202ENST00000453022 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
DEPDC1B-202ENST00000453022 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
DEPDC1B-202ENST00000453022 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
DEPDC1B-202ENST00000453022 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
DEPDC1B-202ENST00000453022 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
DEPDC1B-202ENST00000453022 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
DEPDC1B-202ENST00000453022 INSRP06213 1382 aa12.39□□□□□ -0.43
DEPDC1B-202ENST00000453022 TMF1P82094 1093 aa12.39□□□□□ -0.43
DEPDC1B-202ENST00000453022 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
DEPDC1B-202ENST00000453022 FLT4P35916 1363 aa12.38□□□□□ -0.43
DEPDC1B-202ENST00000453022 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
DEPDC1B-202ENST00000453022 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
DEPDC1B-202ENST00000453022 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
DEPDC1B-202ENST00000453022 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
DEPDC1B-202ENST00000453022 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
DEPDC1B-202ENST00000453022 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
DEPDC1B-202ENST00000453022 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
DEPDC1B-202ENST00000453022 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
DEPDC1B-202ENST00000453022 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
DEPDC1B-202ENST00000453022 POLD1P28340 1107 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 NLGN2Q8NFZ4 835 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 TATP17735 454 aaPredicted RBP12.35□□□□□ -0.43
DEPDC1B-202ENST00000453022 CYP27B1O15528 508 aa12.34□□□□□ -0.43
DEPDC1B-202ENST00000453022 GPR162Q16538 588 aa12.34□□□□□ -0.43
DEPDC1B-202ENST00000453022 COL23A1Q86Y22 540 aaPredicted RBP12.34□□□□□ -0.43
DEPDC1B-202ENST00000453022 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
DEPDC1B-202ENST00000453022 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
DEPDC1B-202ENST00000453022 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
DEPDC1B-202ENST00000453022 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
DEPDC1B-202ENST00000453022 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
DEPDC1B-202ENST00000453022 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1B-202ENST00000453022 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
DEPDC1B-202ENST00000453022 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
DEPDC1B-202ENST00000453022 YBX3P16989 372 aaKnown RBP eCLIP12.3□□□□□ -0.446e-6■□□□□ 10.9
DEPDC1B-202ENST00000453022 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
DEPDC1B-202ENST00000453022 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
DEPDC1B-202ENST00000453022 C1QTNF8P60827 252 aa12.28□□□□□ -0.44
DEPDC1B-202ENST00000453022 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
DEPDC1B-202ENST00000453022 ZNF831Q5JPB2 1677 aa12.27□□□□□ -0.44
DEPDC1B-202ENST00000453022 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.44
DEPDC1B-202ENST00000453022 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.44
DEPDC1B-202ENST00000453022 PIGBQ92521 554 aa12.27□□□□□ -0.44
DEPDC1B-202ENST00000453022 KIAA1551Q9HCM1 1747 aa12.27□□□□□ -0.44
DEPDC1B-202ENST00000453022 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.45
DEPDC1B-202ENST00000453022 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 EYA1Q99502 592 aa12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
DEPDC1B-202ENST00000453022 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
DEPDC1B-202ENST00000453022 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
DEPDC1B-202ENST00000453022 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
DEPDC1B-202ENST00000453022 AK7Q96M32 723 aa12.25□□□□□ -0.45
DEPDC1B-202ENST00000453022 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
DEPDC1B-202ENST00000453022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■■□□□ 13.6
DEPDC1B-202ENST00000453022 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
DEPDC1B-202ENST00000453022 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
DEPDC1B-202ENST00000453022 VIRMAQ69YN4 1812 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-202ENST00000453022 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 PHF14O94880 888 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 PHKG2P15735 406 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 SIK1P57059 783 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms