RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 PPP2R1AP30153 589 aa25.33■■□□□ 1.65
COPS7B-215ENST00000450501 SBF2Q86WG5 1849 aa25.33■■□□□ 1.64
COPS7B-215ENST00000450501 PARD3Q8TEW0 1356 aa25.32■■□□□ 1.64
COPS7B-215ENST00000450501 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
COPS7B-215ENST00000450501 TRIM37O94972 964 aa25.31■■□□□ 1.64
COPS7B-215ENST00000450501 CFAP53Q96M91 514 aa25.31■■□□□ 1.64
COPS7B-215ENST00000450501 SHANK3Q9BYB0 1731 aa25.3■■□□□ 1.64
COPS7B-215ENST00000450501 TNS1Q9HBL0 1735 aaKnown RBP25.3■■□□□ 1.64
COPS7B-215ENST00000450501 DDX54Q8TDD1 881 aaKnown RBP25.3■■□□□ 1.64
COPS7B-215ENST00000450501 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
COPS7B-215ENST00000450501 RALBP1Q15311 655 aa25.28■■□□□ 1.64
COPS7B-215ENST00000450501 KAT6BQ8WYB5 2073 aa25.28■■□□□ 1.64
COPS7B-215ENST00000450501 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
COPS7B-215ENST00000450501 COL3A1P02461 1466 aaPredicted RBP25.28■■□□□ 1.64
COPS7B-215ENST00000450501 BAG6P46379 1132 aa25.27■■□□□ 1.64
COPS7B-215ENST00000450501 PCDH11XQ9BZA7 1347 aa25.27■■□□□ 1.64
COPS7B-215ENST00000450501 PCDH11YQ9BZA8 1340 aa25.27■■□□□ 1.64
COPS7B-215ENST00000450501 SULT6B1Q6IMI4 303 aa25.26■■□□□ 1.63
COPS7B-215ENST00000450501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
COPS7B-215ENST00000450501 SPG7Q9UQ90 795 aa25.26■■□□□ 1.63
COPS7B-215ENST00000450501 KDRP35968 1356 aa25.25■■□□□ 1.63
COPS7B-215ENST00000450501 AEBP1Q8IUX7 1158 aa25.24■■□□□ 1.63
COPS7B-215ENST00000450501 BCL11BQ9C0K0 894 aaPredicted RBP25.24■■□□□ 1.63
COPS7B-215ENST00000450501 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
COPS7B-215ENST00000450501 APBA3O96018 575 aa25.22■■□□□ 1.63
COPS7B-215ENST00000450501 NHSQ6T4R5 1651 aa25.22■■□□□ 1.63
COPS7B-215ENST00000450501 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
COPS7B-215ENST00000450501 NUDCQ9Y266 331 aa25.2■■□□□ 1.62
COPS7B-215ENST00000450501 CYP27B1O15528 508 aa25.19■■□□□ 1.62
COPS7B-215ENST00000450501 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
COPS7B-215ENST00000450501 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
COPS7B-215ENST00000450501 ACSBG1Q96GR2 724 aa25.19■■□□□ 1.62
COPS7B-215ENST00000450501 HMOX1P09601 288 aa25.18■■□□□ 1.62
COPS7B-215ENST00000450501 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
COPS7B-215ENST00000450501 MYBBP1AQ9BQG0 1328 aaKnown RBP25.17■■□□□ 1.62
COPS7B-215ENST00000450501 KCNQ2O43526 872 aa25.17■■□□□ 1.62
COPS7B-215ENST00000450501 EN1Q05925 392 aaPredicted RBP25.17■■□□□ 1.62
COPS7B-215ENST00000450501 PTF1AQ7RTS3 328 aa25.16■■□□□ 1.62
COPS7B-215ENST00000450501 IFNL2Q8IZJ0 200 aa25.16■■□□□ 1.62
COPS7B-215ENST00000450501 PRKRIP1Q9H875 184 aaPredicted RBP25.15■■□□□ 1.62
COPS7B-215ENST00000450501 RGPD3A6NKT7 1758 aaPredicted RBP25.14■■□□□ 1.62
COPS7B-215ENST00000450501 RGPD4Q7Z3J3 1758 aa25.14■■□□□ 1.62
COPS7B-215ENST00000450501 NKX1-1Q15270 411 aaPredicted RBP25.14■■□□□ 1.62
COPS7B-215ENST00000450501 CAMKK2Q96RR4 588 aa25.14■■□□□ 1.62
COPS7B-215ENST00000450501 BTAF1O14981 1849 aa25.14■■□□□ 1.61
COPS7B-215ENST00000450501 PLSCR1O15162 318 aa25.13■■□□□ 1.61
COPS7B-215ENST00000450501 PHKG2P15735 406 aa25.13■■□□□ 1.61
COPS7B-215ENST00000450501 ZNF530Q6P9A1 599 aaPredicted RBP25.13■■□□□ 1.61
COPS7B-215ENST00000450501 SYTL4Q96C24 671 aaPredicted RBP25.13■■□□□ 1.61
COPS7B-215ENST00000450501 PRIM1P49642 420 aaKnown RBP25.12■■□□□ 1.61
COPS7B-215ENST00000450501 U2AF1L5P0DN76 240 aaPredicted RBP25.11■■□□□ 1.61
COPS7B-215ENST00000450501 U2AF1Q01081 240 aaKnown RBP eCLIP25.11■■□□□ 1.61
COPS7B-215ENST00000450501 EZH2Q15910 746 aaKnown RBP25.11■■□□□ 1.61
COPS7B-215ENST00000450501 HSP90AB1P08238 724 aaKnown RBP25.1■■□□□ 1.61
COPS7B-215ENST00000450501 C1orf141Q5JVX7 400 aa25.1■■□□□ 1.61
COPS7B-215ENST00000450501 TOGARAM1Q9Y4F4 1720 aa25.09■■□□□ 1.61
COPS7B-215ENST00000450501 RREB1Q92766 1687 aa25.08■■□□□ 1.61
COPS7B-215ENST00000450501 ITGB4P16144 1822 aa25.08■■□□□ 1.61
COPS7B-215ENST00000450501 DCAF5Q96JK2 942 aa25.07■■□□□ 1.6
COPS7B-215ENST00000450501 FCHSD2O94868 740 aa25.06■■□□□ 1.6
COPS7B-215ENST00000450501 RSPH6AQ9H0K4 717 aa25.06■■□□□ 1.6
COPS7B-215ENST00000450501 PRKAR2BP31323 418 aa25.05■■□□□ 1.6
COPS7B-215ENST00000450501 AKAP4Q5JQC9 854 aa25.04■■□□□ 1.6
COPS7B-215ENST00000450501 MPRIPQ6WCQ1 1025 aa25.04■■□□□ 1.6
COPS7B-215ENST00000450501 MTHFSDQ2M296 383 aaKnown RBP25.03■■□□□ 1.6
COPS7B-215ENST00000450501 NUP188Q5SRE5 1749 aa25.03■■□□□ 1.6
COPS7B-215ENST00000450501 ERVV-2B6SEH9 535 aa25.02■■□□□ 1.6
COPS7B-215ENST00000450501 ANP32CO43423 234 aa25.02■■□□□ 1.6
COPS7B-215ENST00000450501 GAS2L2Q8NHY3 880 aa25.02■■□□□ 1.6
COPS7B-215ENST00000450501 TXNRD1Q16881 649 aa25.01■■□□□ 1.59
COPS7B-215ENST00000450501 TMOD3Q9NYL9 352 aa25.01■■□□□ 1.59
COPS7B-215ENST00000450501 KDM6AO15550 1401 aaPredicted RBP25.01■■□□□ 1.59
COPS7B-215ENST00000450501 SCN11AQ9UI33 1791 aa25■■□□□ 1.59
COPS7B-215ENST00000450501 PROM2Q8N271 834 aa24.99■■□□□ 1.59
COPS7B-215ENST00000450501 PIGBQ92521 554 aa24.99■■□□□ 1.59
COPS7B-215ENST00000450501 PNNQ9H307 717 aaKnown RBP24.99■■□□□ 1.59
COPS7B-215ENST00000450501 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
COPS7B-215ENST00000450501 NEFMP07197 916 aa24.98■■□□□ 1.59
COPS7B-215ENST00000450501 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
COPS7B-215ENST00000450501 LY75O60449 1722 aa24.98■■□□□ 1.59
COPS7B-215ENST00000450501 NBPF14Q5TI25 921 aa24.97■■□□□ 1.59
COPS7B-215ENST00000450501 SMARCC1Q92922 1105 aaPredicted RBP24.97■■□□□ 1.59
COPS7B-215ENST00000450501 CABP4P57796 275 aa24.96■■□□□ 1.59
COPS7B-215ENST00000450501 SLC27A3Q5K4L6 730 aa24.95■■□□□ 1.58
COPS7B-215ENST00000450501 MAP3K5Q99683 1374 aa24.94■■□□□ 1.58
COPS7B-215ENST00000450501 GNAT3A8MTJ3 354 aa24.94■■□□□ 1.58
COPS7B-215ENST00000450501 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
COPS7B-215ENST00000450501 PALLDQ8WX93 1383 aa24.93■■□□□ 1.58
COPS7B-215ENST00000450501 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
COPS7B-215ENST00000450501 ADAMTS7Q9UKP4 1686 aa24.93■■□□□ 1.58
COPS7B-215ENST00000450501 LGR6Q9HBX8 967 aa24.92■■□□□ 1.58
COPS7B-215ENST00000450501 PLEKHF1Q96S99 279 aa24.91■■□□□ 1.58
COPS7B-215ENST00000450501 MAPK8IP3Q9UPT6 1336 aa24.9■■□□□ 1.58
COPS7B-215ENST00000450501 NFATC2IPQ8NCF5 419 aa24.9■■□□□ 1.58
COPS7B-215ENST00000450501 LRRC4BQ9NT99 713 aa24.9■■□□□ 1.58
COPS7B-215ENST00000450501 CCNL1Q9UK58 526 aaPredicted RBP24.9■■□□□ 1.58
COPS7B-215ENST00000450501 ASAP1Q9ULH1 1129 aa24.9■■□□□ 1.58
COPS7B-215ENST00000450501 HMGB2P26583 209 aaKnown RBP24.89■■□□□ 1.58
COPS7B-215ENST00000450501 SLC52A2Q9HAB3 445 aa24.89■■□□□ 1.58
COPS7B-215ENST00000450501 MRC1P22897 1456 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms