RNA–Protein interactions for RNA: ENST00000448979.3

AC023509.3-201, humanhuman

TSL 1 (best)

Gene AC023509.3, Length 1,406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023509.3-201ENST00000448979 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
AC023509.3-201ENST00000448979 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
AC023509.3-201ENST00000448979 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
AC023509.3-201ENST00000448979 LRP5O75197 1615 aa17.23■□□□□ 0.35
AC023509.3-201ENST00000448979 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
AC023509.3-201ENST00000448979 MEGF6O75095 1541 aa17.22■□□□□ 0.35
AC023509.3-201ENST00000448979 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.35
AC023509.3-201ENST00000448979 PLSCR1O15162 318 aa17.21■□□□□ 0.34
AC023509.3-201ENST00000448979 BCL9O00512 1426 aa17.2■□□□□ 0.34
AC023509.3-201ENST00000448979 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
AC023509.3-201ENST00000448979 BTAF1O14981 1849 aa17.2■□□□□ 0.34
AC023509.3-201ENST00000448979 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 RGPD3A6NKT7 1758 aaPredicted RBP17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 RGPD4Q7Z3J3 1758 aa17.19■□□□□ 0.34
AC023509.3-201ENST00000448979 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
AC023509.3-201ENST00000448979 KCNQ4P56696 695 aa17.17■□□□□ 0.34
AC023509.3-201ENST00000448979 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
AC023509.3-201ENST00000448979 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
AC023509.3-201ENST00000448979 PANK3Q9H999 370 aa17.16■□□□□ 0.34
AC023509.3-201ENST00000448979 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
AC023509.3-201ENST00000448979 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
AC023509.3-201ENST00000448979 INSRP06213 1382 aa17.14■□□□□ 0.33
AC023509.3-201ENST00000448979 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 FLT4P35916 1363 aa17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
AC023509.3-201ENST00000448979 ZBTB7AO95365 584 aa17.12■□□□□ 0.33
AC023509.3-201ENST00000448979 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
AC023509.3-201ENST00000448979 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
AC023509.3-201ENST00000448979 NSD2O96028 1365 aa17.11■□□□□ 0.33
AC023509.3-201ENST00000448979 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
AC023509.3-201ENST00000448979 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
AC023509.3-201ENST00000448979 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
AC023509.3-201ENST00000448979 RAPGEF4Q8WZA2 1011 aa17.09■□□□□ 0.33
AC023509.3-201ENST00000448979 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
AC023509.3-201ENST00000448979 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
AC023509.3-201ENST00000448979 EYA1Q99502 592 aa17.08■□□□□ 0.32
AC023509.3-201ENST00000448979 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
AC023509.3-201ENST00000448979 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
AC023509.3-201ENST00000448979 CYP27B1O15528 508 aa17.07■□□□□ 0.32
AC023509.3-201ENST00000448979 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
AC023509.3-201ENST00000448979 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
AC023509.3-201ENST00000448979 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
AC023509.3-201ENST00000448979 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
AC023509.3-201ENST00000448979 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
AC023509.3-201ENST00000448979 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
AC023509.3-201ENST00000448979 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
AC023509.3-201ENST00000448979 LY75O60449 1722 aa17.04■□□□□ 0.32
AC023509.3-201ENST00000448979 ITGB4P16144 1822 aa17.03■□□□□ 0.32
AC023509.3-201ENST00000448979 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
AC023509.3-201ENST00000448979 NCAPD2Q15021 1401 aa17.03■□□□□ 0.32
AC023509.3-201ENST00000448979 PTGER2P43116 358 aa17.03■□□□□ 0.32
AC023509.3-201ENST00000448979 PPP1R1BQ9UD71 204 aaPredicted RBP17.03■□□□□ 0.32
AC023509.3-201ENST00000448979 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.31
AC023509.3-201ENST00000448979 MORC1Q86VD1 984 aa17.02■□□□□ 0.31
AC023509.3-201ENST00000448979 AKT1S1Q96B36 256 aa17.02■□□□□ 0.31
AC023509.3-201ENST00000448979 PCDH11XQ9BZA7 1347 aa17.01■□□□□ 0.31
AC023509.3-201ENST00000448979 PCDH11YQ9BZA8 1340 aa17.01■□□□□ 0.31
AC023509.3-201ENST00000448979 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
AC023509.3-201ENST00000448979 SMIM5Q71RC9 77 aa17■□□□□ 0.31
AC023509.3-201ENST00000448979 AMER1Q5JTC6 1135 aaPredicted RBP16.99■□□□□ 0.31
AC023509.3-201ENST00000448979 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
AC023509.3-201ENST00000448979 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
AC023509.3-201ENST00000448979 CCNL1Q9UK58 526 aaPredicted RBP16.98■□□□□ 0.31
AC023509.3-201ENST00000448979 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
AC023509.3-201ENST00000448979 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
AC023509.3-201ENST00000448979 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
AC023509.3-201ENST00000448979 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
AC023509.3-201ENST00000448979 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
AC023509.3-201ENST00000448979 PIGBQ92521 554 aa16.96■□□□□ 0.31
AC023509.3-201ENST00000448979 IGSF1Q8N6C5 1336 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 PHKG2P15735 406 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 TFCP2L1Q9NZI6 479 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 TAF1LQ8IZX4 1826 aa16.95■□□□□ 0.3
AC023509.3-201ENST00000448979 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
AC023509.3-201ENST00000448979 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
AC023509.3-201ENST00000448979 C5P01031 1676 aa16.93■□□□□ 0.3
AC023509.3-201ENST00000448979 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
AC023509.3-201ENST00000448979 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
AC023509.3-201ENST00000448979 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
AC023509.3-201ENST00000448979 QSER1Q2KHR3 1735 aa16.92■□□□□ 0.3
AC023509.3-201ENST00000448979 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
AC023509.3-201ENST00000448979 IL13P35225 146 aa16.91■□□□□ 0.3
AC023509.3-201ENST00000448979 MTHFSP49914 203 aa16.91■□□□□ 0.3
AC023509.3-201ENST00000448979 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
AC023509.3-201ENST00000448979 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
AC023509.3-201ENST00000448979 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
AC023509.3-201ENST00000448979 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
AC023509.3-201ENST00000448979 ANP32CO43423 234 aa16.89■□□□□ 0.29
AC023509.3-201ENST00000448979 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
AC023509.3-201ENST00000448979 ARXQ96QS3 562 aa16.89■□□□□ 0.29
AC023509.3-201ENST00000448979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms