RNA–Protein interactions for RNA: ENST00000448649.1

EXOSC3P1-201, Transcript of exosome component 3 pseudogene 1, humanhuman

BASIC

Gene EXOSC3P1, Length 500 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3P1-201ENST00000448649 SCTRP47872 440 aa9.72□□□□□ -0.85
EXOSC3P1-201ENST00000448649 EML3Q32P44 896 aa9.72□□□□□ -0.85
EXOSC3P1-201ENST00000448649 PTGIRP43119 386 aa9.71□□□□□ -0.86
EXOSC3P1-201ENST00000448649 TBC1D9Q6ZT07 1266 aa9.71□□□□□ -0.86
EXOSC3P1-201ENST00000448649 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
EXOSC3P1-201ENST00000448649 PURBQ96QR8 312 aaKnown RBP9.71□□□□□ -0.86
EXOSC3P1-201ENST00000448649 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
EXOSC3P1-201ENST00000448649 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 RELBQ01201 579 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 AGBL1Q96MI9 1066 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 GMPR2Q9P2T1 348 aaKnown RBP9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 NOD1Q9Y239 953 aa9.7□□□□□ -0.86
EXOSC3P1-201ENST00000448649 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
EXOSC3P1-201ENST00000448649 USP17L3A6NCW0 530 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 USP17L4A6NCW7 530 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 SPINT1O43278 529 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 GNRH1P01148 92 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 NCOA4Q13772 614 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 USP17L1Q7RTZ2 530 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
EXOSC3P1-201ENST00000448649 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3P1-201ENST00000448649 ZNF787Q6DD87 383 aa9.67□□□□□ -0.86
EXOSC3P1-201ENST00000448649 KDF1Q8NAX2 398 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3P1-201ENST00000448649 ZNF395Q9H8N7 513 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3P1-201ENST00000448649 TRIM50Q86XT4 487 aa9.66□□□□□ -0.86
EXOSC3P1-201ENST00000448649 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
EXOSC3P1-201ENST00000448649 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
EXOSC3P1-201ENST00000448649 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
EXOSC3P1-201ENST00000448649 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
EXOSC3P1-201ENST00000448649 SOS2Q07890 1332 aaPredicted RBP9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 A0A1W2PRU2 124 aa9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ARID3CA6NKF2 412 aa9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ESCO1Q5FWF5 840 aa9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
EXOSC3P1-201ENST00000448649 TTLL8A6PVC2 850 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 POTECB2RU33 542 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 MEN1O00255 615 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 GTF2IP78347 998 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 CLN3Q13286 438 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 INSM2Q96T92 566 aaPredicted RBP9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
EXOSC3P1-201ENST00000448649 GPC1P35052 558 aa9.62□□□□□ -0.87
EXOSC3P1-201ENST00000448649 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
EXOSC3P1-201ENST00000448649 MAN1A2O60476 641 aa9.61□□□□□ -0.87
EXOSC3P1-201ENST00000448649 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
EXOSC3P1-201ENST00000448649 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
EXOSC3P1-201ENST00000448649 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 PSME1Q06323 249 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
EXOSC3P1-201ENST00000448649 GDF10P55107 478 aa9.59□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.87
EXOSC3P1-201ENST00000448649 ETNK1Q9HBU6 452 aa9.59□□□□□ -0.87
EXOSC3P1-201ENST00000448649 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
EXOSC3P1-201ENST00000448649 FIGNL2A6NMB9 653 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 WASLO00401 505 aaPredicted RBP9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 IL2RAP01589 272 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 INHAP05111 366 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 RASA1P20936 1047 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 LARGE2Q8N3Y3 721 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 OGFOD1Q8N543 542 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 DNMT3LQ9UJW3 386 aa9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 RBM19Q9Y4C8 960 aaKnown RBP9.58□□□□□ -0.88
EXOSC3P1-201ENST00000448649 RFX1P22670 979 aa9.57□□□□□ -0.88
EXOSC3P1-201ENST00000448649 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
EXOSC3P1-201ENST00000448649 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
EXOSC3P1-201ENST00000448649 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
EXOSC3P1-201ENST00000448649 RNF217Q8TC41 542 aa9.57□□□□□ -0.88
EXOSC3P1-201ENST00000448649 BACH1O14867 736 aa9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 GTF2E1P29083 439 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 SCNN1DP51172 638 aa9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 CENPCQ03188 943 aa9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
EXOSC3P1-201ENST00000448649 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 SUPT5HO00267 1087 aaKnown RBP9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 CLDN10P78369 228 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 CCDC102BQ68D86 513 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 GRIP2Q9C0E4 1043 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 HRH3Q9Y5N1 445 aa9.55□□□□□ -0.88
EXOSC3P1-201ENST00000448649 FAM196BA6NMK8 535 aa9.54□□□□□ -0.88
EXOSC3P1-201ENST00000448649 SOBPA7XYQ1 873 aa9.54□□□□□ -0.88
EXOSC3P1-201ENST00000448649 TPCN2Q8NHX9 752 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms