RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 MTHFSDQ2M296 383 aaKnown RBP15.68■□□□□ 0.1
SCAP-208ENST00000448217 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
SCAP-208ENST00000448217 RAPGEF4Q8WZA2 1011 aa15.68■□□□□ 0.1
SCAP-208ENST00000448217 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
SCAP-208ENST00000448217 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
SCAP-208ENST00000448217 SPATA31A5Q5VU36 1347 aa15.68■□□□□ 0.1
SCAP-208ENST00000448217 SPATA31A7Q8IWB4 1347 aa15.68■□□□□ 0.1
SCAP-208ENST00000448217 TATP17735 454 aaPredicted RBP15.67■□□□□ 0.1
SCAP-208ENST00000448217 RIPK4P57078 832 aa15.67■□□□□ 0.1
SCAP-208ENST00000448217 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
SCAP-208ENST00000448217 WWC1Q8IX03 1113 aa15.67■□□□□ 0.1
SCAP-208ENST00000448217 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
SCAP-208ENST00000448217 IL2RBP14784 551 aa15.66■□□□□ 0.1
SCAP-208ENST00000448217 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
SCAP-208ENST00000448217 CDCA7Q9BWT1 371 aaPredicted RBP15.66■□□□□ 0.1
SCAP-208ENST00000448217 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
SCAP-208ENST00000448217 MEX3CQ5U5Q3 659 aaKnown RBP15.65■□□□□ 0.1
SCAP-208ENST00000448217 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
SCAP-208ENST00000448217 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
SCAP-208ENST00000448217 IL16Q14005 1332 aa15.65■□□□□ 0.1
SCAP-208ENST00000448217 ATRNO75882 1429 aa15.64■□□□□ 0.09
SCAP-208ENST00000448217 SHANK3Q9BYB0 1731 aa15.64■□□□□ 0.09
SCAP-208ENST00000448217 USP21Q9UK80 565 aa15.64■□□□□ 0.09
SCAP-208ENST00000448217 SPG7Q9UQ90 795 aa15.64■□□□□ 0.09
SCAP-208ENST00000448217 AFF2P51816 1311 aa15.64■□□□□ 0.09
SCAP-208ENST00000448217 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
SCAP-208ENST00000448217 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
SCAP-208ENST00000448217 LRRC37A3O60309 1634 aa15.62■□□□□ 0.09
SCAP-208ENST00000448217 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
SCAP-208ENST00000448217 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
SCAP-208ENST00000448217 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
SCAP-208ENST00000448217 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
SCAP-208ENST00000448217 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
SCAP-208ENST00000448217 ZNF530Q6P9A1 599 aaPredicted RBP15.61■□□□□ 0.09
SCAP-208ENST00000448217 TRMT2AQ8IZ69 625 aaKnown RBP15.61■□□□□ 0.09
SCAP-208ENST00000448217 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
SCAP-208ENST00000448217 CEMIPQ8WUJ3 1361 aa15.61■□□□□ 0.09
SCAP-208ENST00000448217 SLFN5Q08AF3 891 aa15.6■□□□□ 0.09
SCAP-208ENST00000448217 ZCRB1Q8TBF4 217 aaKnown RBP15.6■□□□□ 0.09
SCAP-208ENST00000448217 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
SCAP-208ENST00000448217 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 GLI3P10071 1580 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 E9PSI1 815 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 PHKG2P15735 406 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
SCAP-208ENST00000448217 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 THSD7AQ9UPZ6 1657 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 PCDH11XQ9BZA7 1347 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 TNS2Q63HR2 1409 aa15.59■□□□□ 0.09
SCAP-208ENST00000448217 CYP27B1O15528 508 aa15.58■□□□□ 0.08
SCAP-208ENST00000448217 ONECUT3O60422 494 aaPredicted RBP15.58■□□□□ 0.08
SCAP-208ENST00000448217 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.08
SCAP-208ENST00000448217 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
SCAP-208ENST00000448217 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
SCAP-208ENST00000448217 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
SCAP-208ENST00000448217 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
SCAP-208ENST00000448217 USP35Q9P2H5 1018 aa15.58■□□□□ 0.08
SCAP-208ENST00000448217 IL17REQ8NFR9 667 aa15.57■□□□□ 0.08
SCAP-208ENST00000448217 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
SCAP-208ENST00000448217 IFT57Q9NWB7 429 aa15.57■□□□□ 0.08
SCAP-208ENST00000448217 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
SCAP-208ENST00000448217 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
SCAP-208ENST00000448217 CDCA7LQ96GN5 454 aa15.56■□□□□ 0.08
SCAP-208ENST00000448217 MRC1P22897 1456 aa15.56■□□□□ 0.08
SCAP-208ENST00000448217 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
SCAP-208ENST00000448217 KDM6AO15550 1401 aaPredicted RBP15.55■□□□□ 0.08
SCAP-208ENST00000448217 EXOC5O00471 708 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
SCAP-208ENST00000448217 GNAI1P63096 354 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 DUSP27Q5VZP5 1158 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
SCAP-208ENST00000448217 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
SCAP-208ENST00000448217 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
SCAP-208ENST00000448217 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
SCAP-208ENST00000448217 MCM10Q7L590 875 aa15.54■□□□□ 0.08
SCAP-208ENST00000448217 QTRT2Q9H974 415 aaKnown RBP15.54■□□□□ 0.08
SCAP-208ENST00000448217 CHL1O00533 1208 aa15.53■□□□□ 0.08
SCAP-208ENST00000448217 DDB1Q16531 1140 aa15.53■□□□□ 0.08
SCAP-208ENST00000448217 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
SCAP-208ENST00000448217 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
SCAP-208ENST00000448217 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
SCAP-208ENST00000448217 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
SCAP-208ENST00000448217 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
SCAP-208ENST00000448217 FAM98CQ17RN3 349 aaKnown RBP15.51■□□□□ 0.07
SCAP-208ENST00000448217 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
SCAP-208ENST00000448217 BCL9O00512 1426 aa15.51■□□□□ 0.07
SCAP-208ENST00000448217 FANCIQ9NVI1 1328 aa15.5■□□□□ 0.07
SCAP-208ENST00000448217 TOGARAM1Q9Y4F4 1720 aa15.5■□□□□ 0.07
SCAP-208ENST00000448217 CT47B1P0C2W7 299 aaPredicted RBP15.49■□□□□ 0.07
SCAP-208ENST00000448217 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
SCAP-208ENST00000448217 DDX54Q8TDD1 881 aaKnown RBP15.49■□□□□ 0.07
SCAP-208ENST00000448217 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
SCAP-208ENST00000448217 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
SCAP-208ENST00000448217 TEFQ10587 303 aa15.48■□□□□ 0.07
SCAP-208ENST00000448217 ITGB4P16144 1822 aa15.47■□□□□ 0.07
SCAP-208ENST00000448217 MARCH10Q8NA82 808 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms