RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 NRBP1Q9UHY1 535 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 ERCC6LQ2NKX8 1250 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
SIK3-205ENST00000446921 BRPF1P55201 1214 aaPredicted RBP18.84■□□□□ 0.61
SIK3-205ENST00000446921 RBM6P78332 1123 aaKnown RBP18.84■□□□□ 0.61
SIK3-205ENST00000446921 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
SIK3-205ENST00000446921 POLR1AO95602 1720 aaPredicted RBP18.84■□□□□ 0.61
SIK3-205ENST00000446921 CCAR2Q8N163 923 aaKnown RBP18.84■□□□□ 0.61
SIK3-205ENST00000446921 ANKRD20A12PQ8NF67 263 aa18.84■□□□□ 0.61
SIK3-205ENST00000446921 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
SIK3-205ENST00000446921 ZNF853P0CG23 659 aa18.83■□□□□ 0.61
SIK3-205ENST00000446921 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.61
SIK3-205ENST00000446921 CCDC34Q96HJ3 373 aa18.83■□□□□ 0.61
SIK3-205ENST00000446921 BRMS1Q9HCU9 246 aa18.83■□□□□ 0.61
SIK3-205ENST00000446921 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.83■□□□□ 0.61
SIK3-205ENST00000446921 ARHGAP29Q52LW3 1261 aa18.83■□□□□ 0.61
SIK3-205ENST00000446921 ERO1AQ96HE7 468 aa18.83■□□□□ 0.61
SIK3-205ENST00000446921 UBXN4Q92575 508 aa18.83■□□□□ 0.6
SIK3-205ENST00000446921 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
SIK3-205ENST00000446921 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
SIK3-205ENST00000446921 LCMT1Q9UIC8 334 aa18.83■□□□□ 0.6
SIK3-205ENST00000446921 RRP15Q9Y3B9 282 aaKnown RBP18.83■□□□□ 0.6
SIK3-205ENST00000446921 VIRMAQ69YN4 1812 aaKnown RBP18.83■□□□□ 0.6
SIK3-205ENST00000446921 MAP2K1Q02750 393 aaPredicted RBP18.82■□□□□ 0.6
SIK3-205ENST00000446921 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 CALR3Q96L12 384 aaKnown RBP18.82■□□□□ 0.6
SIK3-205ENST00000446921 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 SUFUQ9UMX1 484 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 H0YHG0 523 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 MAP2K2P36507 400 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 NOP2P46087 812 aaKnown RBP18.82■□□□□ 0.6
SIK3-205ENST00000446921 SARNPP82979 210 aaKnown RBP18.82■□□□□ 0.6
SIK3-205ENST00000446921 SEMA3FQ13275 785 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 TESK2Q96S53 571 aa18.82■□□□□ 0.6
SIK3-205ENST00000446921 WDR33Q9C0J8 1336 aaKnown RBP18.82■□□□□ 0.6
SIK3-205ENST00000446921 ANKRD65E5RJM6 399 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 CLSTN1O94985 981 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 GUCY2CP25092 1073 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
SIK3-205ENST00000446921 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 TSPY4P0CV99 314 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 TSPY10P0CW01 314 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
SIK3-205ENST00000446921 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
SIK3-205ENST00000446921 RNF217Q8TC41 542 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
SIK3-205ENST00000446921 USP26Q9BXU7 913 aa18.8■□□□□ 0.6
SIK3-205ENST00000446921 CXorf56Q9H5V9 222 aa18.8■□□□□ 0.6
SIK3-205ENST00000446921 MNAT1P51948 309 aa18.8■□□□□ 0.6
SIK3-205ENST00000446921 ATP6V1AP38606 617 aa18.8■□□□□ 0.6
SIK3-205ENST00000446921 ST5P78524 1137 aa18.8■□□□□ 0.6
SIK3-205ENST00000446921 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
SIK3-205ENST00000446921 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
SIK3-205ENST00000446921 SMARCE1Q969G3 411 aa18.79■□□□□ 0.6
SIK3-205ENST00000446921 RNF20Q5VTR2 975 aa18.78■□□□□ 0.6
SIK3-205ENST00000446921 ANO2Q9NQ90 1003 aa18.78■□□□□ 0.6
SIK3-205ENST00000446921 BRD1O95696 1058 aa18.78■□□□□ 0.6
SIK3-205ENST00000446921 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
SIK3-205ENST00000446921 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.6
SIK3-205ENST00000446921 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
SIK3-205ENST00000446921 DTNBO60941 627 aa18.77■□□□□ 0.6
SIK3-205ENST00000446921 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.6
SIK3-205ENST00000446921 VPS37CA5D8V6 355 aaPredicted RBP18.77■□□□□ 0.6
SIK3-205ENST00000446921 OAS2P29728 719 aaKnown RBP18.77■□□□□ 0.6
SIK3-205ENST00000446921 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
SIK3-205ENST00000446921 DAPK1P53355 1430 aa18.76■□□□□ 0.59
SIK3-205ENST00000446921 SETQ01105 290 aaPredicted RBP18.76■□□□□ 0.59
SIK3-205ENST00000446921 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
SIK3-205ENST00000446921 PNMA6AP0CW24 399 aaPredicted RBP18.76■□□□□ 0.59
SIK3-205ENST00000446921 SKILP12757 684 aa18.76■□□□□ 0.59
SIK3-205ENST00000446921 GIMAP7Q8NHV1 300 aa18.76■□□□□ 0.59
SIK3-205ENST00000446921 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
SIK3-205ENST00000446921 IBSPP21815 317 aaPredicted RBP18.76■□□□□ 0.59
SIK3-205ENST00000446921 UBE2HP62256 183 aa18.76■□□□□ 0.59
SIK3-205ENST00000446921 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
SIK3-205ENST00000446921 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
SIK3-205ENST00000446921 BECN2A8MW95 431 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 NRDCO43847 1150 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 ATP6V1DQ9Y5K8 247 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
SIK3-205ENST00000446921 AP5Z1O43299 807 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 CLCN6P51797 869 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 CASTP20810 708 aaKnown RBP18.75■□□□□ 0.59
SIK3-205ENST00000446921 CEP120Q8N960 986 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 PIK3R5Q8WYR1 880 aa18.75■□□□□ 0.59
SIK3-205ENST00000446921 FAM200AQ8TCP9 573 aa18.74■□□□□ 0.59
SIK3-205ENST00000446921 KIF14Q15058 1648 aa18.74■□□□□ 0.59
SIK3-205ENST00000446921 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
SIK3-205ENST00000446921 ERC2O15083 957 aa18.73■□□□□ 0.59
SIK3-205ENST00000446921 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
SIK3-205ENST00000446921 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
SIK3-205ENST00000446921 CACTINQ8WUQ7 758 aaKnown RBP18.73■□□□□ 0.59
SIK3-205ENST00000446921 PSMD1Q99460 953 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms