RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GTF3C6Q969F1 213 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 KIF5CO60282 957 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 UBTFL1P0CB47 393 aaPredicted RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 RLBP1P12271 317 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 CPLX2Q6PUV4 134 aaKnown RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 C9orf78Q9NZ63 289 aaPredicted RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 CASTP20810 708 aaKnown RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 NUTM2DQ5VT03 806 aaPredicted RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 CERS3Q8IU89 383 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 CCDC150Q8NCX0 1101 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 DHX16O60231 1041 aaKnown RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 ZNHIT6Q9NWK9 470 aaKnown RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 JMYQ8N9B5 988 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 CRACR2AQ9BSW2 395 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
SMG1-202ENST00000446231 GNAI3P08754 354 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 GNG11P61952 73 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 TMX3Q96JJ7 454 aa9.24□□□□□ -0.93
SMG1-202ENST00000446231 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
SMG1-202ENST00000446231 MAP9Q49MG5 647 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 PLEKHH2Q8IVE3 1493 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 MICALCLQ6ZW33 695 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 ZNF75DP51815 510 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 HMOX1P09601 288 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 MCM3P25205 808 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 SHTN1A0MZ66 631 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 TTC22Q5TAA0 569 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 ALDH1L2Q3SY69 923 aa9.23□□□□□ -0.93
SMG1-202ENST00000446231 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
SMG1-202ENST00000446231 NF2P35240 595 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 FERMT3Q86UX7 667 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 C10orf67Q8IYJ2 551 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 ZNF428Q96B54 188 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 FILIP1LQ4L180 1135 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 NFXL1Q6ZNB6 911 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 DHX29Q7Z478 1369 aaKnown RBP9.22□□□□□ -0.93
SMG1-202ENST00000446231 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 HDXQ7Z353 690 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 COG3Q96JB2 828 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 DDX19AQ9NUU7 478 aaKnown RBP9.22□□□□□ -0.93
SMG1-202ENST00000446231 MYCBPQ99417 103 aaPredicted RBP9.22□□□□□ -0.93
SMG1-202ENST00000446231 FSD1Q9BTV5 496 aa9.22□□□□□ -0.93
SMG1-202ENST00000446231 TWISTNBQ3B726 338 aaPredicted RBP9.21□□□□□ -0.93
SMG1-202ENST00000446231 TDRD9Q8NDG6 1382 aaKnown RBP9.21□□□□□ -0.93
SMG1-202ENST00000446231 MAPKBP1O60336 1514 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 ERBB4Q15303 1308 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 CCDC83Q8IWF9 413 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 CFAP100Q494V2 611 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 CCDC69A6NI79 296 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 ODF2Q5BJF6 829 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 TOP1P11387 765 aaKnown RBP9.21□□□□□ -0.93
SMG1-202ENST00000446231 EFCAB2Q5VUJ9 269 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 RAI14Q9P0K7 980 aa9.21□□□□□ -0.93
SMG1-202ENST00000446231 ELF2Q15723 593 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 TMC6Q7Z403 805 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 ZSCAN22P10073 491 aaPredicted RBP9.21□□□□□ -0.94
SMG1-202ENST00000446231 CCDC148Q8NFR7 591 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 DNAI1Q9UI46 699 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 LRRFIP1Q32MZ4 808 aaKnown RBP9.21□□□□□ -0.94
SMG1-202ENST00000446231 TMX1Q9H3N1 280 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 SDSP20132 328 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 ZGPATQ8N5A5 531 aaKnown RBP9.21□□□□□ -0.94
SMG1-202ENST00000446231 ZSWIM4Q9H7M6 989 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 TFIP11Q9UBB9 837 aaKnown RBP9.21□□□□□ -0.94
SMG1-202ENST00000446231 GOLGA6L7A0A1B0GV03 622 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 KIF4BQ2VIQ3 1234 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 PLPPR3Q6T4P5 718 aa9.21□□□□□ -0.94
SMG1-202ENST00000446231 ANKRD50Q9ULJ7 1429 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 NCOA2Q15596 1464 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 SLC4A2P04920 1241 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 LUZP1Q86V48 1076 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
SMG1-202ENST00000446231 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
SMG1-202ENST00000446231 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
SMG1-202ENST00000446231 CAPN2P17655 700 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 NECTIN2Q92692 538 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
SMG1-202ENST00000446231 GGNBP2Q9H3C7 697 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 TICAM2Q86XR7 235 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 INCENPQ9NQS7 918 aa9.2□□□□□ -0.94
SMG1-202ENST00000446231 CLASRPQ8N2M8 674 aaKnown RBP9.2□□□□□ -0.94
SMG1-202ENST00000446231 EBAG9O00559 213 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 RPAP2Q8IXW5 612 aaPredicted RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 STK3Q13188 491 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 ZRSR2Q15696 482 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms