RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
LTBR-204ENST00000444814 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
LTBR-204ENST00000444814 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
LTBR-204ENST00000444814 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
LTBR-204ENST00000444814 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
LTBR-204ENST00000444814 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
LTBR-204ENST00000444814 BCL9O00512 1426 aa16.49■□□□□ 0.23
LTBR-204ENST00000444814 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
LTBR-204ENST00000444814 PCDH11XQ9BZA7 1347 aa16.48■□□□□ 0.23
LTBR-204ENST00000444814 PCDH11YQ9BZA8 1340 aa16.48■□□□□ 0.23
LTBR-204ENST00000444814 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
LTBR-204ENST00000444814 EYA1Q99502 592 aa16.47■□□□□ 0.23
LTBR-204ENST00000444814 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
LTBR-204ENST00000444814 ZNF316A6NFI3 1004 aaPredicted RBP16.47■□□□□ 0.23
LTBR-204ENST00000444814 RALBP1Q15311 655 aa16.47■□□□□ 0.23
LTBR-204ENST00000444814 USHBP1Q8N6Y0 703 aa16.47■□□□□ 0.23
LTBR-204ENST00000444814 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
LTBR-204ENST00000444814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
LTBR-204ENST00000444814 TRIM37O94972 964 aa16.46■□□□□ 0.23
LTBR-204ENST00000444814 FAM182BQ5T319 152 aa16.46■□□□□ 0.23
LTBR-204ENST00000444814 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
LTBR-204ENST00000444814 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
LTBR-204ENST00000444814 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
LTBR-204ENST00000444814 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
LTBR-204ENST00000444814 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
LTBR-204ENST00000444814 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
LTBR-204ENST00000444814 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
LTBR-204ENST00000444814 APBA3O96018 575 aa16.43■□□□□ 0.22
LTBR-204ENST00000444814 HMGB2P26583 209 aaKnown RBP16.43■□□□□ 0.22
LTBR-204ENST00000444814 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
LTBR-204ENST00000444814 MEGF6O75095 1541 aa16.43■□□□□ 0.22
LTBR-204ENST00000444814 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
LTBR-204ENST00000444814 IL13P35225 146 aa16.43■□□□□ 0.22
LTBR-204ENST00000444814 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
LTBR-204ENST00000444814 NEFMP07197 916 aa16.4■□□□□ 0.22
LTBR-204ENST00000444814 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
LTBR-204ENST00000444814 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
LTBR-204ENST00000444814 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
LTBR-204ENST00000444814 C1orf141Q5JVX7 400 aa16.38■□□□□ 0.21
LTBR-204ENST00000444814 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
LTBR-204ENST00000444814 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
LTBR-204ENST00000444814 KDRP35968 1356 aa16.37■□□□□ 0.21
LTBR-204ENST00000444814 PLSCR1O15162 318 aa16.37■□□□□ 0.21
LTBR-204ENST00000444814 KCNA4P22459 653 aa16.37■□□□□ 0.21
LTBR-204ENST00000444814 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
LTBR-204ENST00000444814 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
LTBR-204ENST00000444814 EN1Q05925 392 aaPredicted RBP16.36■□□□□ 0.21
LTBR-204ENST00000444814 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
LTBR-204ENST00000444814 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
LTBR-204ENST00000444814 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
LTBR-204ENST00000444814 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
LTBR-204ENST00000444814 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
LTBR-204ENST00000444814 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
LTBR-204ENST00000444814 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
LTBR-204ENST00000444814 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.2
LTBR-204ENST00000444814 CYP27B1O15528 508 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 HMOX1P09601 288 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 PHKG2P15735 406 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
LTBR-204ENST00000444814 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 CAMKK2Q96RR4 588 aa16.33■□□□□ 0.2
LTBR-204ENST00000444814 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
LTBR-204ENST00000444814 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
LTBR-204ENST00000444814 GAS2L2Q8NHY3 880 aa16.32■□□□□ 0.2
LTBR-204ENST00000444814 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
LTBR-204ENST00000444814 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
LTBR-204ENST00000444814 ANP32CO43423 234 aa16.31■□□□□ 0.2
LTBR-204ENST00000444814 FCHSD2O94868 740 aa16.31■□□□□ 0.2
LTBR-204ENST00000444814 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
LTBR-204ENST00000444814 AKAP4Q5JQC9 854 aa16.31■□□□□ 0.2
LTBR-204ENST00000444814 KCNQ2O43526 872 aa16.3■□□□□ 0.2
LTBR-204ENST00000444814 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
LTBR-204ENST00000444814 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
LTBR-204ENST00000444814 SLC27A3Q5K4L6 730 aa16.3■□□□□ 0.2
LTBR-204ENST00000444814 PRKRIP1Q9H875 184 aaPredicted RBP16.3■□□□□ 0.2
LTBR-204ENST00000444814 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
LTBR-204ENST00000444814 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
LTBR-204ENST00000444814 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
LTBR-204ENST00000444814 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
LTBR-204ENST00000444814 CABP4P57796 275 aa16.27■□□□□ 0.2
LTBR-204ENST00000444814 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
LTBR-204ENST00000444814 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
LTBR-204ENST00000444814 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.19
LTBR-204ENST00000444814 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
LTBR-204ENST00000444814 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
LTBR-204ENST00000444814 DOT1LQ8TEK3 1739 aa16.26■□□□□ 0.19
LTBR-204ENST00000444814 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
LTBR-204ENST00000444814 STK32BQ9NY57 414 aa16.26■□□□□ 0.19
LTBR-204ENST00000444814 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
LTBR-204ENST00000444814 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
LTBR-204ENST00000444814 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
LTBR-204ENST00000444814 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
LTBR-204ENST00000444814 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
LTBR-204ENST00000444814 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
LTBR-204ENST00000444814 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
LTBR-204ENST00000444814 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
LTBR-204ENST00000444814 BTAF1O14981 1849 aa16.22■□□□□ 0.19
LTBR-204ENST00000444814 PIGBQ92521 554 aa16.21■□□□□ 0.19
LTBR-204ENST00000444814 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms