RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PXDNLA1KZ92 1463 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 N4BP2Q86UW6 1770 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 PPM1GO15355 546 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 PAK3O75914 559 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 CNGB1Q14028 1251 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 TAF7Q15545 349 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 LRRC59Q96AG4 307 aaKnown RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 CLUAP1Q96AJ1 413 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 PHACTR3Q96KR7 559 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 ORAI2Q96SN7 254 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 SPINK5Q9NQ38 1064 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 LTBP4Q8N2S1 1624 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 ERBB3P21860 1342 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 KDM2BQ8NHM5 1336 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 MAP3K5Q99683 1374 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 HEG1Q9ULI3 1381 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 SIPA1L3O60292 1781 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-201ENST00000443621 KDM3BQ7LBC6 1761 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 HMOX1P09601 288 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 HMGB2P26583 209 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 EXOSC9Q06265 439 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 HDAC1Q13547 482 aaPredicted RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 MVPQ14764 893 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 NKX1-1Q15270 411 aaPredicted RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 INTS3Q68E01 1043 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 BRINP3Q76B58 766 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 DZIP1LQ8IYY4 767 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 CDCA7Q9BWT1 371 aaPredicted RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 RWDD1Q9H446 243 aaPredicted RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 ZRANB1Q9UGI0 708 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 SPG7Q9UQ90 795 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 ABCA3Q99758 1704 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 COL14A1Q05707 1796 aaKnown RBP3.6□□□□□ -1.83
LINC00393-201ENST00000443621 SCN11AQ9UI33 1791 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 MRC1P22897 1456 aa3.6□□□□□ -1.83
LINC00393-201ENST00000443621 PLCH1Q4KWH8 1693 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 NWD2Q9ULI1 1742 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 VIRMAQ69YN4 1812 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 NUTM2FA1L443 756 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 ERVV-2B6SEH9 535 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 TULP1O00294 542 aaPredicted RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 TRIM27P14373 513 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 CCT4P50991 539 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 NEUROD2Q15784 382 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 MTHFSDQ2M296 383 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 CCDC30Q5VVM6 783 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 NBPF6Q5VWK0 638 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 RPAP2Q8IXW5 612 aaPredicted RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 SMC5Q8IY18 1101 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 FTSJ3Q8IY81 847 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 IFNL2Q8IZJ0 200 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 MRPL50Q8N5N7 158 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 EXOC6Q8TAG9 804 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 ANKRD24Q8TF21 1146 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 SSH1Q8WYL5 1049 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 RAPGEF4Q8WZA2 1011 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 DCAF5Q96JK2 942 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 NBPF4Q96M43 638 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 CARD10Q9BWT7 1032 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 MBIPQ9NS73 344 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 SMC4Q9NTJ3 1288 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 ZBTB40Q9NUA8 1239 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 THRAP3Q9Y2W1 955 aaKnown RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 SALL2Q9Y467 1007 aaPredicted RBP3.59□□□□□ -1.83
LINC00393-201ENST00000443621 ABCC4O15439 1325 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 ERBB4Q15303 1308 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 WDR17Q8IZU2 1322 aa3.59□□□□□ -1.83
LINC00393-201ENST00000443621 RGS12O14924 1447 aa3.59□□□□□ -1.84
LINC00393-201ENST00000443621 LRP6O75581 1613 aa3.59□□□□□ -1.84
LINC00393-201ENST00000443621 ZBTB7BO15156 539 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 RGL2O15211 777 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 TOM1O60784 492 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 BCAR3O75815 825 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 TATP17735 454 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 CANXP27824 592 aaKnown RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 HSPA2P54652 639 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 C1orf141Q5JVX7 400 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 TICAM2Q86XR7 235 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 AEBP1Q8IUX7 1158 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 CRBNQ96SW2 442 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 STK31Q9BXU1 1019 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 TEX13AQ9BXU3 409 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 TSPYL4Q9UJ04 414 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 RRP7AQ9Y3A4 280 aaKnown RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 ATP10DQ9P241 1426 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 COL5A2P05997 1499 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 CICQ96RK0 1608 aaPredicted RBP3.58□□□□□ -1.84
LINC00393-201ENST00000443621 RGPD5Q99666 1765 aa3.58□□□□□ -1.84
LINC00393-201ENST00000443621 RNMTO43148 476 aaKnown RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 EPB41L2O43491 1005 aaKnown RBP3.57□□□□□ -1.84
LINC00393-201ENST00000443621 GNAI3P08754 354 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 RGPD2P0DJD1 1756 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 FBLN1P23142 703 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 COL15A1P39059 1388 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 TEFQ10587 303 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 ZNF831Q5JPB2 1677 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 VSIG10Q8N0Z9 540 aa3.57□□□□□ -1.84
LINC00393-201ENST00000443621 C8orf58Q8NAV2 365 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms