RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
CPNE1-218ENST00000439806 KDRP35968 1356 aa13.14□□□□□ -0.31
CPNE1-218ENST00000439806 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-218ENST00000439806 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
CPNE1-218ENST00000439806 NUCB1Q02818 461 aa13.12□□□□□ -0.31
CPNE1-218ENST00000439806 BECN1Q14457 450 aa13.12□□□□□ -0.31
CPNE1-218ENST00000439806 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
CPNE1-218ENST00000439806 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
CPNE1-218ENST00000439806 USP19O94966 1318 aa13.12□□□□□ -0.31
CPNE1-218ENST00000439806 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
CPNE1-218ENST00000439806 SEC24BO95487 1268 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 C1orf115Q9H7X2 142 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
CPNE1-218ENST00000439806 PTPRCP08575 1304 aa13.11□□□□□ -0.31
CPNE1-218ENST00000439806 FOXO3O43524 673 aa13.1□□□□□ -0.31
CPNE1-218ENST00000439806 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
CPNE1-218ENST00000439806 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-218ENST00000439806 PSME1Q06323 249 aa13.09□□□□□ -0.31
CPNE1-218ENST00000439806 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
CPNE1-218ENST00000439806 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
CPNE1-218ENST00000439806 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
CPNE1-218ENST00000439806 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
CPNE1-218ENST00000439806 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
CPNE1-218ENST00000439806 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
CPNE1-218ENST00000439806 NFAT5O94916 1531 aa13.08□□□□□ -0.31
CPNE1-218ENST00000439806 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
CPNE1-218ENST00000439806 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
CPNE1-218ENST00000439806 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
CPNE1-218ENST00000439806 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
CPNE1-218ENST00000439806 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
CPNE1-218ENST00000439806 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
CPNE1-218ENST00000439806 RGS12O14924 1447 aa13.07□□□□□ -0.32
CPNE1-218ENST00000439806 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
CPNE1-218ENST00000439806 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
CPNE1-218ENST00000439806 MSH6P52701 1360 aa13.07□□□□□ -0.32
CPNE1-218ENST00000439806 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
CPNE1-218ENST00000439806 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
CPNE1-218ENST00000439806 MFAP1P55081 439 aaKnown RBP13.06□□□□□ -0.32
CPNE1-218ENST00000439806 IP6K1Q92551 441 aa13.06□□□□□ -0.32
CPNE1-218ENST00000439806 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
CPNE1-218ENST00000439806 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
CPNE1-218ENST00000439806 N4BP2Q86UW6 1770 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-218ENST00000439806 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
CPNE1-218ENST00000439806 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
CPNE1-218ENST00000439806 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-218ENST00000439806 SLIT3O75094 1523 aa13.04□□□□□ -0.32
CPNE1-218ENST00000439806 C22orf23Q9BZE7 217 aa13.04□□□□□ -0.32
CPNE1-218ENST00000439806 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-218ENST00000439806 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
CPNE1-218ENST00000439806 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 RPAP2Q8IXW5 612 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-218ENST00000439806 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 BABAM1Q9NWV8 329 aa13.03□□□□□ -0.32
CPNE1-218ENST00000439806 KDM3BQ7LBC6 1761 aa13.02□□□□□ -0.32
CPNE1-218ENST00000439806 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-218ENST00000439806 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-218ENST00000439806 ATP10DQ9P241 1426 aa13.02□□□□□ -0.33
CPNE1-218ENST00000439806 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
CPNE1-218ENST00000439806 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
CPNE1-218ENST00000439806 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
CPNE1-218ENST00000439806 HMMRO75330 724 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 CEP85Q6P2H3 762 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 G2E3Q7L622 706 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 IL17REQ8NFR9 667 aa13□□□□□ -0.33
CPNE1-218ENST00000439806 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
CPNE1-218ENST00000439806 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-218ENST00000439806 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-218ENST00000439806 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
CPNE1-218ENST00000439806 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
CPNE1-218ENST00000439806 MEIS3Q99687 375 aa12.99□□□□□ -0.33
CPNE1-218ENST00000439806 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 CDC45O75419 566 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-218ENST00000439806 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
CPNE1-218ENST00000439806 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 F6X3S4 739 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 FLIIQ13045 1269 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-218ENST00000439806 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-218ENST00000439806 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
CPNE1-218ENST00000439806 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
CPNE1-218ENST00000439806 GCP02774 474 aa12.96□□□□□ -0.33
CPNE1-218ENST00000439806 GNAI3P08754 354 aa12.96□□□□□ -0.33
CPNE1-218ENST00000439806 ARHGEF25Q86VW2 580 aa12.96□□□□□ -0.33
CPNE1-218ENST00000439806 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
CPNE1-218ENST00000439806 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms