RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 HOXC9P31274 260 aa11.57□□□□□ -0.56
RPE-211ENST00000438265 RRS1Q15050 365 aaKnown RBP11.57□□□□□ -0.56
RPE-211ENST00000438265 UBR3Q6ZT12 1888 aa11.56□□□□□ -0.56
RPE-211ENST00000438265 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
RPE-211ENST00000438265 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
RPE-211ENST00000438265 VIRMAQ69YN4 1812 aaKnown RBP11.56□□□□□ -0.56
RPE-211ENST00000438265 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
RPE-211ENST00000438265 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
RPE-211ENST00000438265 FYB1O15117 783 aa11.55□□□□□ -0.56
RPE-211ENST00000438265 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
RPE-211ENST00000438265 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPE-211ENST00000438265 TMF1P82094 1093 aa11.54□□□□□ -0.56
RPE-211ENST00000438265 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
RPE-211ENST00000438265 DDX54Q8TDD1 881 aaKnown RBP11.54□□□□□ -0.56
RPE-211ENST00000438265 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
RPE-211ENST00000438265 FHDC1Q9C0D6 1143 aaPredicted RBP11.54□□□□□ -0.56
RPE-211ENST00000438265 TERF2IPQ9NYB0 399 aa11.54□□□□□ -0.56
RPE-211ENST00000438265 PPP1R1BQ9UD71 204 aaPredicted RBP11.54□□□□□ -0.56
RPE-211ENST00000438265 YY1P25490 414 aa11.53□□□□□ -0.56
RPE-211ENST00000438265 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
RPE-211ENST00000438265 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
RPE-211ENST00000438265 STK32BQ9NY57 414 aa11.53□□□□□ -0.56
RPE-211ENST00000438265 PRIM1P49642 420 aaKnown RBP11.52□□□□□ -0.57
RPE-211ENST00000438265 SYT17Q9BSW7 474 aa11.52□□□□□ -0.57
RPE-211ENST00000438265 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
RPE-211ENST00000438265 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
RPE-211ENST00000438265 COG3Q96JB2 828 aa11.51□□□□□ -0.57
RPE-211ENST00000438265 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
RPE-211ENST00000438265 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
RPE-211ENST00000438265 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
RPE-211ENST00000438265 AMPHP49418 695 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 MTFR1LQ9H019 292 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 EMILIN1Q9Y6C2 1016 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 RTL1A6NKG5 1358 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
RPE-211ENST00000438265 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
RPE-211ENST00000438265 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
RPE-211ENST00000438265 KIAA1551Q9HCM1 1747 aa11.47□□□□□ -0.57
RPE-211ENST00000438265 CYP27B1O15528 508 aa11.47□□□□□ -0.57
RPE-211ENST00000438265 HSPA5P11021 654 aaKnown RBP11.47□□□□□ -0.57
RPE-211ENST00000438265 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
RPE-211ENST00000438265 INSRP06213 1382 aa11.46□□□□□ -0.57
RPE-211ENST00000438265 NLGN2Q8NFZ4 835 aa11.46□□□□□ -0.57
RPE-211ENST00000438265 ARXQ96QS3 562 aa11.46□□□□□ -0.57
RPE-211ENST00000438265 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.58
RPE-211ENST00000438265 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
RPE-211ENST00000438265 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
RPE-211ENST00000438265 FLT4P35916 1363 aa11.44□□□□□ -0.58
RPE-211ENST00000438265 MAP3K5Q99683 1374 aa11.44□□□□□ -0.58
RPE-211ENST00000438265 C4AP0C0L4 1744 aa11.44□□□□□ -0.58
RPE-211ENST00000438265 COL23A1Q86Y22 540 aaPredicted RBP11.44□□□□□ -0.58
RPE-211ENST00000438265 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
RPE-211ENST00000438265 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
RPE-211ENST00000438265 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
RPE-211ENST00000438265 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
RPE-211ENST00000438265 SLC27A3Q5K4L6 730 aa11.42□□□□□ -0.58
RPE-211ENST00000438265 CCNL1Q9UK58 526 aaPredicted RBP11.42□□□□□ -0.58
RPE-211ENST00000438265 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
RPE-211ENST00000438265 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
RPE-211ENST00000438265 TFCP2L1Q9NZI6 479 aa11.41□□□□□ -0.58
RPE-211ENST00000438265 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
RPE-211ENST00000438265 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
RPE-211ENST00000438265 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
RPE-211ENST00000438265 EYA1Q99502 592 aa11.4□□□□□ -0.58
RPE-211ENST00000438265 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
RPE-211ENST00000438265 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
RPE-211ENST00000438265 TJP1Q07157 1748 aa11.4□□□□□ -0.58
RPE-211ENST00000438265 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
RPE-211ENST00000438265 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
RPE-211ENST00000438265 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
RPE-211ENST00000438265 PIGBQ92521 554 aa11.39□□□□□ -0.59
RPE-211ENST00000438265 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
RPE-211ENST00000438265 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
RPE-211ENST00000438265 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
RPE-211ENST00000438265 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
RPE-211ENST00000438265 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
RPE-211ENST00000438265 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
RPE-211ENST00000438265 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
RPE-211ENST00000438265 WASHC2AQ641Q2 1341 aa11.37□□□□□ -0.59
RPE-211ENST00000438265 TNNT2P45379 298 aaPredicted RBP11.37□□□□□ -0.59
RPE-211ENST00000438265 ITPK1Q13572 414 aa11.37□□□□□ -0.59
RPE-211ENST00000438265 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
RPE-211ENST00000438265 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
RPE-211ENST00000438265 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
RPE-211ENST00000438265 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
RPE-211ENST00000438265 KIF7Q2M1P5 1343 aa11.36□□□□□ -0.59
RPE-211ENST00000438265 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
RPE-211ENST00000438265 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
RPE-211ENST00000438265 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
RPE-211ENST00000438265 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
RPE-211ENST00000438265 MSH5O43196 834 aa11.35□□□□□ -0.59
RPE-211ENST00000438265 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
RPE-211ENST00000438265 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
RPE-211ENST00000438265 AFDNP55196 1824 aaKnown RBP11.35□□□□□ -0.59
RPE-211ENST00000438265 KDRP35968 1356 aa11.34□□□□□ -0.59
RPE-211ENST00000438265 GPR162Q16538 588 aa11.34□□□□□ -0.59
RPE-211ENST00000438265 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 PHF14O94880 888 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 PHKG2P15735 406 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms