RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
GSE1-206ENST00000438180 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
GSE1-206ENST00000438180 NBPF4Q96M43 638 aa21.49■■□□□ 1.03
GSE1-206ENST00000438180 CRB1P82279 1406 aa21.49■■□□□ 1.03
GSE1-206ENST00000438180 TWISTNBQ3B726 338 aaPredicted RBP21.49■■□□□ 1.03
GSE1-206ENST00000438180 KIAA0232Q92628 1395 aa21.49■■□□□ 1.03
GSE1-206ENST00000438180 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
GSE1-206ENST00000438180 PANK1Q8TE04 598 aa21.48■■□□□ 1.03
GSE1-206ENST00000438180 FAM208AQ9UK61 1670 aaKnown RBP21.48■■□□□ 1.03
GSE1-206ENST00000438180 SOS2Q07890 1332 aaPredicted RBP21.47■■□□□ 1.03
GSE1-206ENST00000438180 VAMP4O75379 141 aa21.47■■□□□ 1.03
GSE1-206ENST00000438180 DZIP1LQ8IYY4 767 aaKnown RBP21.47■■□□□ 1.03
GSE1-206ENST00000438180 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
GSE1-206ENST00000438180 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 AMOTQ4VCS5 1084 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 ATF7IPQ6VMQ6 1270 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
GSE1-206ENST00000438180 USHBP1Q8N6Y0 703 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 CPDO75976 1380 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 ZC3H6P61129 1189 aaKnown RBP21.46■■□□□ 1.03
GSE1-206ENST00000438180 BABAM1Q9NWV8 329 aa21.46■■□□□ 1.03
GSE1-206ENST00000438180 RGPD5Q99666 1765 aa21.45■■□□□ 1.03
GSE1-206ENST00000438180 ERBB3P21860 1342 aa21.45■■□□□ 1.02
GSE1-206ENST00000438180 CLUAP1Q96AJ1 413 aa21.45■■□□□ 1.02
GSE1-206ENST00000438180 NHSL1Q5SYE7 1610 aa21.45■■□□□ 1.02
GSE1-206ENST00000438180 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
GSE1-206ENST00000438180 COL18A1P39060 1754 aa21.44■■□□□ 1.02
GSE1-206ENST00000438180 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
GSE1-206ENST00000438180 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
GSE1-206ENST00000438180 PLEKHG2Q9H7P9 1386 aa21.43■■□□□ 1.02
GSE1-206ENST00000438180 LMO7Q8WWI1 1683 aa21.43■■□□□ 1.02
GSE1-206ENST00000438180 TRIM27P14373 513 aa21.43■■□□□ 1.02
GSE1-206ENST00000438180 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
GSE1-206ENST00000438180 LRRC59Q96AG4 307 aaKnown RBP21.43■■□□□ 1.02
GSE1-206ENST00000438180 TSPYL6Q8N831 410 aa21.42■■□□□ 1.02
GSE1-206ENST00000438180 C8orf58Q8NAV2 365 aa21.42■■□□□ 1.02
GSE1-206ENST00000438180 TSPYL4Q9UJ04 414 aa21.42■■□□□ 1.02
GSE1-206ENST00000438180 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
GSE1-206ENST00000438180 RLBP1P12271 317 aa21.41■■□□□ 1.02
GSE1-206ENST00000438180 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
GSE1-206ENST00000438180 MRPL50Q8N5N7 158 aaKnown RBP21.41■■□□□ 1.02
GSE1-206ENST00000438180 DDX19BQ9UMR2 479 aa21.41■■□□□ 1.02
GSE1-206ENST00000438180 SOS1Q07889 1333 aaPredicted RBP21.4■■□□□ 1.02
GSE1-206ENST00000438180 AKAP4Q5JQC9 854 aa21.4■■□□□ 1.02
GSE1-206ENST00000438180 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.01
GSE1-206ENST00000438180 OVOS2A0A0G2JMS6 1433 aa21.39■■□□□ 1.01
GSE1-206ENST00000438180 ELL2O00472 640 aaPredicted RBP21.38■■□□□ 1.01
GSE1-206ENST00000438180 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
GSE1-206ENST00000438180 CEMIPQ8WUJ3 1361 aa21.38■■□□□ 1.01
GSE1-206ENST00000438180 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
GSE1-206ENST00000438180 C1orf141Q5JVX7 400 aa21.38■■□□□ 1.01
GSE1-206ENST00000438180 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
GSE1-206ENST00000438180 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
GSE1-206ENST00000438180 RAPGEF4Q8WZA2 1011 aa21.36■■□□□ 1.01
GSE1-206ENST00000438180 ABCA3Q99758 1704 aa21.36■■□□□ 1.01
GSE1-206ENST00000438180 API5Q9BZZ5 524 aaKnown RBP21.36■■□□□ 1.01
GSE1-206ENST00000438180 TNNQ9UQP3 1299 aa21.36■■□□□ 1.01
GSE1-206ENST00000438180 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
GSE1-206ENST00000438180 CSB-PGBD3P0DP91 1061 aa21.35■■□□□ 1.01
GSE1-206ENST00000438180 ITPRIPQ8IWB1 547 aa21.35■■□□□ 1.01
GSE1-206ENST00000438180 NLRP2Q9NX02 1062 aa21.35■■□□□ 1.01
GSE1-206ENST00000438180 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
GSE1-206ENST00000438180 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
GSE1-206ENST00000438180 PRDM11Q9NQV5 511 aa21.32■■□□□ 1
GSE1-206ENST00000438180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 13e-7■■□□□ 14.3
GSE1-206ENST00000438180 LTBP4Q8N2S1 1624 aa21.32■■□□□ 1
GSE1-206ENST00000438180 TMEM57Q8N5G2 664 aa21.32■■□□□ 1
GSE1-206ENST00000438180 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
GSE1-206ENST00000438180 TEFQ10587 303 aa21.31■■□□□ 1
GSE1-206ENST00000438180 CHRNA2Q15822 529 aa21.31■■□□□ 1
GSE1-206ENST00000438180 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
GSE1-206ENST00000438180 PTPRCP08575 1304 aa21.31■■□□□ 1
GSE1-206ENST00000438180 RWDD1Q9H446 243 aaPredicted RBP21.3■■□□□ 1
GSE1-206ENST00000438180 SPG7Q9UQ90 795 aa21.3■■□□□ 1
GSE1-206ENST00000438180 ABCC4O15439 1325 aa21.3■■□□□ 1
GSE1-206ENST00000438180 CACNA1FO60840 1977 aa21.3■■□□□ 1
GSE1-206ENST00000438180 ROBO1Q9Y6N7 1651 aa21.3■■□□□ 1
GSE1-206ENST00000438180 AHDC1Q5TGY3 1603 aaPredicted RBP21.3■■□□□ 1
GSE1-206ENST00000438180 KDM3BQ7LBC6 1761 aa21.29■■□□□ 1
GSE1-206ENST00000438180 KRT24Q2M2I5 525 aa21.29■■□□□ 1
GSE1-206ENST00000438180 STK31Q9BXU1 1019 aa21.28■■□□□ 1
GSE1-206ENST00000438180 ADAMTS7Q9UKP4 1686 aa21.28■■□□□ 1
GSE1-206ENST00000438180 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
GSE1-206ENST00000438180 CCDC30Q5VVM6 783 aa21.27■■□□□ 1
GSE1-206ENST00000438180 WDR17Q8IZU2 1322 aa21.27■□□□□ 0.99
GSE1-206ENST00000438180 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
GSE1-206ENST00000438180 HOXB7P09629 217 aa21.26■□□□□ 0.99
GSE1-206ENST00000438180 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
GSE1-206ENST00000438180 MPRIPQ6WCQ1 1025 aa21.25■□□□□ 0.99
GSE1-206ENST00000438180 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
GSE1-206ENST00000438180 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
GSE1-206ENST00000438180 RBM19Q9Y4C8 960 aaKnown RBP21.25■□□□□ 0.99
GSE1-206ENST00000438180 PCDHB15Q9Y5E8 787 aa21.25■□□□□ 0.99
GSE1-206ENST00000438180 MEGF6O75095 1541 aa21.25■□□□□ 0.99
GSE1-206ENST00000438180 COL5A2P05997 1499 aaPredicted RBP21.24■□□□□ 0.99
GSE1-206ENST00000438180 IGHDP01880 384 aa21.24■□□□□ 0.99
GSE1-206ENST00000438180 BTBD11A6QL63 1104 aa21.24■□□□□ 0.99
GSE1-206ENST00000438180 SLC4A2P04920 1241 aa21.24■□□□□ 0.99
GSE1-206ENST00000438180 SIPA1L3O60292 1781 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms