RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 KCNQ4P56696 695 aa12.36□□□□□ -0.43
CTDSPL-205ENST00000436654 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
CTDSPL-205ENST00000436654 EMILIN1Q9Y6C2 1016 aa12.36□□□□□ -0.43
CTDSPL-205ENST00000436654 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
CTDSPL-205ENST00000436654 CLSPNQ9HAW4 1339 aa12.36□□□□□ -0.43
CTDSPL-205ENST00000436654 INSRP06213 1382 aa12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 FLT4P35916 1363 aa12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
CTDSPL-205ENST00000436654 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
CTDSPL-205ENST00000436654 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
CTDSPL-205ENST00000436654 NSD2O96028 1365 aa12.32□□□□□ -0.44
CTDSPL-205ENST00000436654 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
CTDSPL-205ENST00000436654 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
CTDSPL-205ENST00000436654 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
CTDSPL-205ENST00000436654 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
CTDSPL-205ENST00000436654 TNNT2P45379 298 aaPredicted RBP12.31□□□□□ -0.44
CTDSPL-205ENST00000436654 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
CTDSPL-205ENST00000436654 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
CTDSPL-205ENST00000436654 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
CTDSPL-205ENST00000436654 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 BTAF1O14981 1849 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 MYOM1P52179 1685 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 C1QTNF8P60827 252 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 ARXQ96QS3 562 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 PCDH11XQ9BZA7 1347 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 PCDH11YQ9BZA8 1340 aa12.3□□□□□ -0.44
CTDSPL-205ENST00000436654 CYP27B1O15528 508 aa12.29□□□□□ -0.44
CTDSPL-205ENST00000436654 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
CTDSPL-205ENST00000436654 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
CTDSPL-205ENST00000436654 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
CTDSPL-205ENST00000436654 MSH5O43196 834 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 EYA1Q99502 592 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 RGPD2P0DJD1 1756 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
CTDSPL-205ENST00000436654 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
CTDSPL-205ENST00000436654 PANK3Q9H999 370 aa12.26□□□□□ -0.45
CTDSPL-205ENST00000436654 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
CTDSPL-205ENST00000436654 POLD1P28340 1107 aa12.25□□□□□ -0.45
CTDSPL-205ENST00000436654 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
CTDSPL-205ENST00000436654 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
CTDSPL-205ENST00000436654 UTRNP46939 3433 aa12.24□□□□□ -0.45
CTDSPL-205ENST00000436654 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
CTDSPL-205ENST00000436654 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
CTDSPL-205ENST00000436654 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
CTDSPL-205ENST00000436654 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
CTDSPL-205ENST00000436654 PIGBQ92521 554 aa12.23□□□□□ -0.45
CTDSPL-205ENST00000436654 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
CTDSPL-205ENST00000436654 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
CTDSPL-205ENST00000436654 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
CTDSPL-205ENST00000436654 PHKG2P15735 406 aa12.21□□□□□ -0.45
CTDSPL-205ENST00000436654 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
CTDSPL-205ENST00000436654 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
CTDSPL-205ENST00000436654 CHD4Q14839 1912 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 GPR162Q16538 588 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 SMIM5Q71RC9 77 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
CTDSPL-205ENST00000436654 PHF14O94880 888 aa12.19□□□□□ -0.46
CTDSPL-205ENST00000436654 AK7Q96M32 723 aa12.19□□□□□ -0.46
CTDSPL-205ENST00000436654 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
CTDSPL-205ENST00000436654 LY75O60449 1722 aa12.19□□□□□ -0.46
CTDSPL-205ENST00000436654 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 SIK1P57059 783 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
CTDSPL-205ENST00000436654 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
CTDSPL-205ENST00000436654 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
CTDSPL-205ENST00000436654 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
CTDSPL-205ENST00000436654 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CTDSPL-205ENST00000436654 FLAD1Q8NFF5 587 aa12.17□□□□□ -0.46
CTDSPL-205ENST00000436654 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 ITPK1Q13572 414 aa12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 ATG3Q9NT62 314 aa12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 CEP350Q5VT06 3117 aa12.16□□□□□ -0.46
CTDSPL-205ENST00000436654 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.46
CTDSPL-205ENST00000436654 GNPATO15228 680 aa12.14□□□□□ -0.47
CTDSPL-205ENST00000436654 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms