RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 CCDC9Q9Y3X0 531 aaKnown RBP12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
AC004448.3-201ENST00000435953 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 HTATSF1O43719 755 aaKnown RBP12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 ZCRB1Q8TBF4 217 aaKnown RBP12.97□□□□□ -0.33
AC004448.3-201ENST00000435953 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
AC004448.3-201ENST00000435953 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.34
AC004448.3-201ENST00000435953 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
AC004448.3-201ENST00000435953 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
AC004448.3-201ENST00000435953 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
AC004448.3-201ENST00000435953 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 EXOC5O00471 708 aa12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
AC004448.3-201ENST00000435953 CYP27B1O15528 508 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 PHKG2P15735 406 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 MCM10Q7L590 875 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
AC004448.3-201ENST00000435953 OVOS2A0A0G2JMS6 1433 aa12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 MEGF6O75095 1541 aa12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
AC004448.3-201ENST00000435953 IL16Q14005 1332 aa12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 E9PSI1 815 aa12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
AC004448.3-201ENST00000435953 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
AC004448.3-201ENST00000435953 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
AC004448.3-201ENST00000435953 DDB1Q16531 1140 aa12.9□□□□□ -0.34
AC004448.3-201ENST00000435953 ATRNO75882 1429 aa12.89□□□□□ -0.35
AC004448.3-201ENST00000435953 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
AC004448.3-201ENST00000435953 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
AC004448.3-201ENST00000435953 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
AC004448.3-201ENST00000435953 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 GNAI1P63096 354 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
AC004448.3-201ENST00000435953 FAM208AQ9UK61 1670 aaKnown RBP12.87□□□□□ -0.35
AC004448.3-201ENST00000435953 CHL1O00533 1208 aa12.87□□□□□ -0.35
AC004448.3-201ENST00000435953 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
AC004448.3-201ENST00000435953 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
AC004448.3-201ENST00000435953 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 TEFQ10587 303 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 MARCH10Q8NA82 808 aaPredicted RBP12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
AC004448.3-201ENST00000435953 A0A0G2JS52 829 aa12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 MYT1Q01538 1121 aa12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
AC004448.3-201ENST00000435953 RXRBP28702 533 aa12.84□□□□□ -0.35
AC004448.3-201ENST00000435953 CABP4P57796 275 aa12.84□□□□□ -0.35
AC004448.3-201ENST00000435953 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
AC004448.3-201ENST00000435953 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
AC004448.3-201ENST00000435953 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
AC004448.3-201ENST00000435953 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
AC004448.3-201ENST00000435953 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
AC004448.3-201ENST00000435953 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
AC004448.3-201ENST00000435953 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
AC004448.3-201ENST00000435953 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
AC004448.3-201ENST00000435953 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
AC004448.3-201ENST00000435953 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
AC004448.3-201ENST00000435953 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
AC004448.3-201ENST00000435953 KCNQ3O43525 872 aa12.79□□□□□ -0.36
AC004448.3-201ENST00000435953 PIGBQ92521 554 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms