RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 IPO8O15397 1037 aaKnown RBP16.42■□□□□ 0.22
DDX56-204ENST00000431640 GNAI1P63096 354 aa16.42■□□□□ 0.22
DDX56-204ENST00000431640 AXIN2Q9Y2T1 843 aa16.42■□□□□ 0.22
DDX56-204ENST00000431640 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
DDX56-204ENST00000431640 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
DDX56-204ENST00000431640 HMOX1P09601 288 aa16.41■□□□□ 0.22
DDX56-204ENST00000431640 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
DDX56-204ENST00000431640 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
DDX56-204ENST00000431640 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
DDX56-204ENST00000431640 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
DDX56-204ENST00000431640 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
DDX56-204ENST00000431640 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
DDX56-204ENST00000431640 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
DDX56-204ENST00000431640 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
DDX56-204ENST00000431640 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
DDX56-204ENST00000431640 MVPQ14764 893 aaKnown RBP16.39■□□□□ 0.21
DDX56-204ENST00000431640 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
DDX56-204ENST00000431640 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
DDX56-204ENST00000431640 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
DDX56-204ENST00000431640 JCADQ9P266 1359 aa16.39■□□□□ 0.21
DDX56-204ENST00000431640 COL14A1Q05707 1796 aaKnown RBP16.39■□□□□ 0.21
DDX56-204ENST00000431640 AMPHP49418 695 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 IP6K1Q92551 441 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 IGHDP01880 384 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 SSH1Q8WYL5 1049 aa16.38■□□□□ 0.21
DDX56-204ENST00000431640 RWDD1Q9H446 243 aaPredicted RBP16.38■□□□□ 0.21
DDX56-204ENST00000431640 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
DDX56-204ENST00000431640 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
DDX56-204ENST00000431640 RLBP1P12271 317 aa16.36■□□□□ 0.21
DDX56-204ENST00000431640 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
DDX56-204ENST00000431640 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
DDX56-204ENST00000431640 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
DDX56-204ENST00000431640 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
DDX56-204ENST00000431640 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
DDX56-204ENST00000431640 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
DDX56-204ENST00000431640 FAM83GA6ND36 823 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 ERBB3P21860 1342 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
DDX56-204ENST00000431640 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
DDX56-204ENST00000431640 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
DDX56-204ENST00000431640 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
DDX56-204ENST00000431640 TRIM27P14373 513 aa16.33■□□□□ 0.2
DDX56-204ENST00000431640 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
DDX56-204ENST00000431640 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
DDX56-204ENST00000431640 EYA1Q99502 592 aa16.33■□□□□ 0.2
DDX56-204ENST00000431640 VAMP4O75379 141 aa16.32■□□□□ 0.2
DDX56-204ENST00000431640 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
DDX56-204ENST00000431640 PCDHB15Q9Y5E8 787 aa16.32■□□□□ 0.2
DDX56-204ENST00000431640 ADAMTS2O95450 1211 aa16.31■□□□□ 0.2
DDX56-204ENST00000431640 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
DDX56-204ENST00000431640 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
DDX56-204ENST00000431640 KDRP35968 1356 aa16.31■□□□□ 0.2
DDX56-204ENST00000431640 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
DDX56-204ENST00000431640 SLIT2O94813 1529 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 RGS3P49796 1198 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 DLG5Q8TDM6 1919 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
DDX56-204ENST00000431640 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
DDX56-204ENST00000431640 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
DDX56-204ENST00000431640 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
DDX56-204ENST00000431640 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
DDX56-204ENST00000431640 NPM2Q86SE8 214 aaKnown RBP16.28■□□□□ 0.2
DDX56-204ENST00000431640 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
DDX56-204ENST00000431640 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
DDX56-204ENST00000431640 C8orf34Q49A92 452 aa16.27■□□□□ 0.2
DDX56-204ENST00000431640 FBXO41Q8TF61 875 aa16.27■□□□□ 0.2
DDX56-204ENST00000431640 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
DDX56-204ENST00000431640 MEGF6O75095 1541 aa16.26■□□□□ 0.19
DDX56-204ENST00000431640 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
DDX56-204ENST00000431640 WDR17Q8IZU2 1322 aa16.26■□□□□ 0.19
DDX56-204ENST00000431640 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
DDX56-204ENST00000431640 TMEM57Q8N5G2 664 aa16.26■□□□□ 0.19
DDX56-204ENST00000431640 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
DDX56-204ENST00000431640 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
DDX56-204ENST00000431640 ZBTB40Q9NUA8 1239 aa16.25■□□□□ 0.19
DDX56-204ENST00000431640 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
DDX56-204ENST00000431640 CHL1O00533 1208 aa16.24■□□□□ 0.19
DDX56-204ENST00000431640 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
DDX56-204ENST00000431640 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
DDX56-204ENST00000431640 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
DDX56-204ENST00000431640 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
DDX56-204ENST00000431640 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
DDX56-204ENST00000431640 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
DDX56-204ENST00000431640 STRN4Q9NRL3 753 aa16.23■□□□□ 0.19
DDX56-204ENST00000431640 CRB1P82279 1406 aa16.22■□□□□ 0.19
DDX56-204ENST00000431640 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms