RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
PTCH1-207ENST00000429896 AK7Q96M32 723 aa15.92■□□□□ 0.14
PTCH1-207ENST00000429896 BCL11BQ9C0K0 894 aaPredicted RBP15.92■□□□□ 0.14
PTCH1-207ENST00000429896 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
PTCH1-207ENST00000429896 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
PTCH1-207ENST00000429896 CCT4P50991 539 aaKnown RBP15.92■□□□□ 0.14
PTCH1-207ENST00000429896 DRC7Q8IY82 874 aa15.92■□□□□ 0.14
PTCH1-207ENST00000429896 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
PTCH1-207ENST00000429896 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
PTCH1-207ENST00000429896 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
PTCH1-207ENST00000429896 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
PTCH1-207ENST00000429896 LRRFIP1Q32MZ4 808 aaKnown RBP15.91■□□□□ 0.14
PTCH1-207ENST00000429896 PPRC1Q5VV67 1664 aaKnown RBP15.91■□□□□ 0.14
PTCH1-207ENST00000429896 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-207ENST00000429896 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
PTCH1-207ENST00000429896 GOLGA6L4A6NEF3 574 aa15.9■□□□□ 0.14
PTCH1-207ENST00000429896 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
PTCH1-207ENST00000429896 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
PTCH1-207ENST00000429896 EYA1Q99502 592 aa15.9■□□□□ 0.14
PTCH1-207ENST00000429896 AAMPQ13685 434 aa15.9■□□□□ 0.14
PTCH1-207ENST00000429896 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-207ENST00000429896 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
PTCH1-207ENST00000429896 POLR3AO14802 1390 aaPredicted RBP15.89■□□□□ 0.13
PTCH1-207ENST00000429896 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
PTCH1-207ENST00000429896 SLFN5Q08AF3 891 aa15.88■□□□□ 0.13
PTCH1-207ENST00000429896 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
PTCH1-207ENST00000429896 E9PCH4 1651 aa15.88■□□□□ 0.13
PTCH1-207ENST00000429896 GNL2Q13823 731 aaKnown RBP15.88■□□□□ 0.13
PTCH1-207ENST00000429896 NEUROD6Q96NK8 337 aa15.88■□□□□ 0.13
PTCH1-207ENST00000429896 RILPL2Q969X0 211 aa15.87■□□□□ 0.13
PTCH1-207ENST00000429896 FAM83GA6ND36 823 aa15.87■□□□□ 0.13
PTCH1-207ENST00000429896 GOLGA6L6A8MZA4 724 aa15.87■□□□□ 0.13
PTCH1-207ENST00000429896 GNAI2P04899 355 aa15.87■□□□□ 0.13
PTCH1-207ENST00000429896 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
PTCH1-207ENST00000429896 A0A087WZG4 1122 aa15.86■□□□□ 0.13
PTCH1-207ENST00000429896 FAM98CQ17RN3 349 aaKnown RBP15.86■□□□□ 0.13
PTCH1-207ENST00000429896 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
PTCH1-207ENST00000429896 PRM3Q9NNZ6 103 aa15.86■□□□□ 0.13
PTCH1-207ENST00000429896 CNNM1Q9NRU3 951 aa15.86■□□□□ 0.13
PTCH1-207ENST00000429896 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
PTCH1-207ENST00000429896 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
PTCH1-207ENST00000429896 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
PTCH1-207ENST00000429896 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 BCAR3O75815 825 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
PTCH1-207ENST00000429896 PHF14O94880 888 aa15.84■□□□□ 0.13
PTCH1-207ENST00000429896 ADGRL3Q9HAR2 1447 aa15.84■□□□□ 0.13
PTCH1-207ENST00000429896 LARP1Q6PKG0 1096 aaKnown RBP15.84■□□□□ 0.13
PTCH1-207ENST00000429896 TOMM22Q9NS69 142 aa15.84■□□□□ 0.13
PTCH1-207ENST00000429896 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-207ENST00000429896 TRIM34Q9BYJ4 488 aa15.84■□□□□ 0.13
PTCH1-207ENST00000429896 FANCIQ9NVI1 1328 aa15.83■□□□□ 0.13
PTCH1-207ENST00000429896 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 NPC1L1Q9UHC9 1359 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 ATP7BP35670 1465 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 RFC4P35249 363 aa15.83■□□□□ 0.12
PTCH1-207ENST00000429896 CCDC57Q2TAC2 916 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 ERC2O15083 957 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 GZF1Q9H116 711 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-207ENST00000429896 DIAPH3Q9NSV4 1193 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
PTCH1-207ENST00000429896 ZNF772Q68DY9 489 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-207ENST00000429896 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-207ENST00000429896 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 MPHOSPH8Q99549 860 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 MYD88Q99836 296 aa15.82■□□□□ 0.12
PTCH1-207ENST00000429896 IL16Q14005 1332 aa15.81■□□□□ 0.12
PTCH1-207ENST00000429896 PER1O15534 1290 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-207ENST00000429896 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
PTCH1-207ENST00000429896 ALDH1L2Q3SY69 923 aa15.81■□□□□ 0.12
PTCH1-207ENST00000429896 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
PTCH1-207ENST00000429896 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-207ENST00000429896 NBPF14Q5TI25 921 aa15.8■□□□□ 0.12
PTCH1-207ENST00000429896 IL13P35225 146 aa15.8■□□□□ 0.12
PTCH1-207ENST00000429896 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
PTCH1-207ENST00000429896 USP6P35125 1406 aa15.8■□□□□ 0.12
PTCH1-207ENST00000429896 NOL8Q76FK4 1167 aaKnown RBP15.8■□□□□ 0.12
PTCH1-207ENST00000429896 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
PTCH1-207ENST00000429896 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
PTCH1-207ENST00000429896 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
PTCH1-207ENST00000429896 NFATC2IPQ8NCF5 419 aa15.79■□□□□ 0.12
PTCH1-207ENST00000429896 GNL3LQ9NVN8 582 aaKnown RBP15.79■□□□□ 0.12
PTCH1-207ENST00000429896 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
PTCH1-207ENST00000429896 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
PTCH1-207ENST00000429896 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
PTCH1-207ENST00000429896 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
PTCH1-207ENST00000429896 C1orf115Q9H7X2 142 aa15.78■□□□□ 0.12
PTCH1-207ENST00000429896 CREBRFQ8IUR6 639 aa15.78■□□□□ 0.12
PTCH1-207ENST00000429896 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
PTCH1-207ENST00000429896 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
PTCH1-207ENST00000429896 NBPF6Q5VWK0 638 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms