RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 BCL11BQ9C0K0 894 aaPredicted RBP9.15□□□□□ -0.94
CNOT4-206ENST00000428680 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
CNOT4-206ENST00000428680 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.94
CNOT4-206ENST00000428680 RAD21O60216 631 aa9.15□□□□□ -0.95
CNOT4-206ENST00000428680 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.95
CNOT4-206ENST00000428680 SLC4A10Q6U841 1118 aa9.15□□□□□ -0.95
CNOT4-206ENST00000428680 APBB1O00213 710 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 PLSCR1O15162 318 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 TOMM22Q9NS69 142 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
CNOT4-206ENST00000428680 SPON1Q9HCB6 807 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 BTG4Q9NY30 223 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 CAMTA1Q9Y6Y1 1673 aa9.14□□□□□ -0.95
CNOT4-206ENST00000428680 NRKQ7Z2Y5 1582 aa9.13□□□□□ -0.95
CNOT4-206ENST00000428680 AMOTL1Q8IY63 956 aa9.13□□□□□ -0.95
CNOT4-206ENST00000428680 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
CNOT4-206ENST00000428680 USP6P35125 1406 aa9.13□□□□□ -0.95
CNOT4-206ENST00000428680 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
CNOT4-206ENST00000428680 WAPLQ7Z5K2 1190 aa9.13□□□□□ -0.95
CNOT4-206ENST00000428680 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
CNOT4-206ENST00000428680 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
CNOT4-206ENST00000428680 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 CRYBG1Q9Y4K1 1723 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
CNOT4-206ENST00000428680 EIF2S2P20042 333 aaKnown RBP9.12□□□□□ -0.95
CNOT4-206ENST00000428680 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 FAM177BA6PVY3 158 aa9.12□□□□□ -0.95
CNOT4-206ENST00000428680 POLD1P28340 1107 aa9.11□□□□□ -0.95
CNOT4-206ENST00000428680 DDB1Q16531 1140 aa9.11□□□□□ -0.95
CNOT4-206ENST00000428680 ACEP12821 1306 aa9.11□□□□□ -0.95
CNOT4-206ENST00000428680 WDR17Q8IZU2 1322 aa9.11□□□□□ -0.95
CNOT4-206ENST00000428680 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
CNOT4-206ENST00000428680 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 CPSF1Q10570 1443 aaKnown RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 EXOC5O00471 708 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 DDX58O95786 925 aaKnown RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 SAMD1Q6SPF0 538 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 GPATCH3Q96I76 525 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
CNOT4-206ENST00000428680 RREB1Q92766 1687 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 PLEKHH1Q9ULM0 1364 aa9.1□□□□□ -0.95
CNOT4-206ENST00000428680 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
CNOT4-206ENST00000428680 C16orf71Q8IYS4 520 aaPredicted RBP9.09□□□□□ -0.95
CNOT4-206ENST00000428680 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
CNOT4-206ENST00000428680 LMO7Q8WWI1 1683 aa9.09□□□□□ -0.95
CNOT4-206ENST00000428680 TNS2Q63HR2 1409 aa9.08□□□□□ -0.96
CNOT4-206ENST00000428680 MARCH6O60337 910 aa9.08□□□□□ -0.96
CNOT4-206ENST00000428680 AKAP12Q02952 1782 aa9.08□□□□□ -0.96
CNOT4-206ENST00000428680 KIAA0232Q92628 1395 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 APBA3O96018 575 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
CNOT4-206ENST00000428680 NSD2O96028 1365 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 FAM83GA6ND36 823 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 KCNQ2O43526 872 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 HMMRO75330 724 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 GCP02774 474 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 PLEKHO1Q53GL0 409 aaPredicted RBP9.07□□□□□ -0.96
CNOT4-206ENST00000428680 C9orf78Q9NZ63 289 aaPredicted RBP9.07□□□□□ -0.96
CNOT4-206ENST00000428680 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
CNOT4-206ENST00000428680 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-206ENST00000428680 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
CNOT4-206ENST00000428680 TPRNQ4KMQ1 711 aa9.06□□□□□ -0.96
CNOT4-206ENST00000428680 ANO8Q9HCE9 1232 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-206ENST00000428680 FKBP8Q14318 412 aa9.06□□□□□ -0.96
CNOT4-206ENST00000428680 FAM98CQ17RN3 349 aaKnown RBP9.06□□□□□ -0.96
CNOT4-206ENST00000428680 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
CNOT4-206ENST00000428680 TNS1Q9HBL0 1735 aaKnown RBP9.06□□□□□ -0.96
CNOT4-206ENST00000428680 QSER1Q2KHR3 1735 aa9.06□□□□□ -0.96
CNOT4-206ENST00000428680 RRP7AQ9Y3A4 280 aaKnown RBP9.05□□□□□ -0.96
CNOT4-206ENST00000428680 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
CNOT4-206ENST00000428680 ELL2O00472 640 aaPredicted RBP9.05□□□□□ -0.96
CNOT4-206ENST00000428680 MCCP23508 829 aa9.05□□□□□ -0.96
CNOT4-206ENST00000428680 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
CNOT4-206ENST00000428680 HSPA5P11021 654 aaKnown RBP9.04□□□□□ -0.96
CNOT4-206ENST00000428680 SMC4Q9NTJ3 1288 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 IL2RBP14784 551 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 CABP4P57796 275 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 PDZRN3Q9UPQ7 1066 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 SPG7Q9UQ90 795 aa9.04□□□□□ -0.96
CNOT4-206ENST00000428680 DIAPH1O60610 1272 aaKnown RBP9.04□□□□□ -0.96
CNOT4-206ENST00000428680 MTFR1LQ9H019 292 aa9.03□□□□□ -0.96
CNOT4-206ENST00000428680 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
CNOT4-206ENST00000428680 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
CNOT4-206ENST00000428680 TCERG1O14776 1098 aaKnown RBP9.03□□□□□ -0.96
CNOT4-206ENST00000428680 CAMKK2Q96RR4 588 aa9.03□□□□□ -0.96
CNOT4-206ENST00000428680 NHSQ6T4R5 1651 aa9.03□□□□□ -0.96
CNOT4-206ENST00000428680 LRRFIP1Q32MZ4 808 aaKnown RBP9.03□□□□□ -0.96
CNOT4-206ENST00000428680 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
CNOT4-206ENST00000428680 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
CNOT4-206ENST00000428680 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
CNOT4-206ENST00000428680 RIC3Q7Z5B4 369 aa9.02□□□□□ -0.97
CNOT4-206ENST00000428680 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
CNOT4-206ENST00000428680 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
CNOT4-206ENST00000428680 PRR36Q9H6K5 1346 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms