RNA–Protein interactions for RNA: ENST00000427982.5

GDNF-204, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-204ENST00000427982 DDX54Q8TDD1 881 aaKnown RBP30.05■■■□□ 2.4
GDNF-204ENST00000427982 SMG6Q86US8 1419 aaKnown RBP30.05■■■□□ 2.4
GDNF-204ENST00000427982 TUBGCP6Q96RT7 1819 aa30.04■■■□□ 2.4
GDNF-204ENST00000427982 SLC15A2Q16348 729 aa30.04■■■□□ 2.4
GDNF-204ENST00000427982 PKD1L3Q7Z443 1732 aa30.03■■■□□ 2.4
GDNF-204ENST00000427982 ZCRB1Q8TBF4 217 aaKnown RBP30.02■■■□□ 2.4
GDNF-204ENST00000427982 STK32BQ9NY57 414 aa30.02■■■□□ 2.4
GDNF-204ENST00000427982 USHBP1Q8N6Y0 703 aa30.01■■■□□ 2.39
GDNF-204ENST00000427982 NSD2O96028 1365 aa30.01■■■□□ 2.39
GDNF-204ENST00000427982 CGNL1Q0VF96 1302 aa29.99■■■□□ 2.39
GDNF-204ENST00000427982 NCAPD2Q15021 1401 aa29.99■■■□□ 2.39
GDNF-204ENST00000427982 LRRC4BQ9NT99 713 aa29.99■■■□□ 2.39
GDNF-204ENST00000427982 EMILIN1Q9Y6C2 1016 aa29.99■■■□□ 2.39
GDNF-204ENST00000427982 ITGB4P16144 1822 aa29.99■■■□□ 2.39
GDNF-204ENST00000427982 TOGARAM1Q9Y4F4 1720 aa29.97■■■□□ 2.39
GDNF-204ENST00000427982 CCER1Q8TC90 406 aaPredicted RBP29.97■■■□□ 2.39
GDNF-204ENST00000427982 COL24A1Q17RW2 1714 aa29.96■■■□□ 2.39
GDNF-204ENST00000427982 HSPA5P11021 654 aaKnown RBP29.96■■■□□ 2.39
GDNF-204ENST00000427982 EIF4G2P78344 907 aaKnown RBP eCLIP29.96■■■□□ 2.39
GDNF-204ENST00000427982 PTGER2P43116 358 aa29.95■■■□□ 2.39
GDNF-204ENST00000427982 ZBTB7AO95365 584 aa29.94■■■□□ 2.38
GDNF-204ENST00000427982 PRIM1P49642 420 aaKnown RBP29.94■■■□□ 2.38
GDNF-204ENST00000427982 RAPGEF4Q8WZA2 1011 aa29.94■■■□□ 2.38
GDNF-204ENST00000427982 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
GDNF-204ENST00000427982 PPP1R1BQ9UD71 204 aaPredicted RBP29.93■■■□□ 2.38
GDNF-204ENST00000427982 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
GDNF-204ENST00000427982 SLC27A3Q5K4L6 730 aa29.91■■■□□ 2.38
GDNF-204ENST00000427982 WASHC2AQ641Q2 1341 aa29.91■■■□□ 2.38
GDNF-204ENST00000427982 TATP17735 454 aaPredicted RBP29.9■■■□□ 2.38
GDNF-204ENST00000427982 AKT1S1Q96B36 256 aa29.89■■■□□ 2.38
GDNF-204ENST00000427982 SYTL4Q96C24 671 aaPredicted RBP29.89■■■□□ 2.38
GDNF-204ENST00000427982 SGIP1Q9BQI5 828 aa29.89■■■□□ 2.38
GDNF-204ENST00000427982 POLR3GLQ9BT43 218 aa29.88■■■□□ 2.37
GDNF-204ENST00000427982 MTFR1LQ9H019 292 aa29.88■■■□□ 2.37
GDNF-204ENST00000427982 ATF5Q9Y2D1 282 aaPredicted RBP29.88■■■□□ 2.37
GDNF-204ENST00000427982 POLKQ9UBT6 870 aa29.87■■■□□ 2.37
GDNF-204ENST00000427982 C5P01031 1676 aa29.87■■■□□ 2.37
GDNF-204ENST00000427982 PCDH11XQ9BZA7 1347 aa29.87■■■□□ 2.37
GDNF-204ENST00000427982 PCDH11YQ9BZA8 1340 aa29.87■■■□□ 2.37
GDNF-204ENST00000427982 CYP27B1O15528 508 aa29.85■■■□□ 2.37
GDNF-204ENST00000427982 PPM1GO15355 546 aaPredicted RBP29.84■■■□□ 2.37
GDNF-204ENST00000427982 KCNQ4P56696 695 aa29.83■■■□□ 2.37
GDNF-204ENST00000427982 PANK3Q9H999 370 aa29.82■■■□□ 2.36
GDNF-204ENST00000427982 EYA1Q99502 592 aa29.81■■■□□ 2.36
GDNF-204ENST00000427982 PNPLA7Q6ZV29 1317 aa29.79■■■□□ 2.36
GDNF-204ENST00000427982 NKX1-1Q15270 411 aaPredicted RBP29.76■■■□□ 2.35
GDNF-204ENST00000427982 CCNL1Q9UK58 526 aaPredicted RBP29.76■■■□□ 2.35
GDNF-204ENST00000427982 TNNT2P45379 298 aaPredicted RBP29.75■■■□□ 2.35
GDNF-204ENST00000427982 EIF4A2Q14240 407 aaKnown RBP29.75■■■□□ 2.35
GDNF-204ENST00000427982 UTRNP46939 3433 aa29.75■■■□□ 2.35
GDNF-204ENST00000427982 SLC16A10Q8TF71 515 aa29.74■■■□□ 2.35
GDNF-204ENST00000427982 FHDC1Q9C0D6 1143 aaPredicted RBP29.74■■■□□ 2.35
GDNF-204ENST00000427982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.74■■■□□ 2.35
GDNF-204ENST00000427982 PLEKHG2Q9H7P9 1386 aa29.73■■■□□ 2.35
GDNF-204ENST00000427982 UBR3Q6ZT12 1888 aa29.72■■■□□ 2.35
GDNF-204ENST00000427982 SYT17Q9BSW7 474 aa29.72■■■□□ 2.35
GDNF-204ENST00000427982 MAP3K5Q99683 1374 aa29.72■■■□□ 2.35
GDNF-204ENST00000427982 C4BP0C0L5 1744 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 CHD4Q14839 1912 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 TFCP2L1Q9NZI6 479 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 SPG7Q9UQ90 795 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 PALLDQ8WX93 1383 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 IGSF1Q8N6C5 1336 aa29.71■■■□□ 2.35
GDNF-204ENST00000427982 MPRIPQ6WCQ1 1025 aa29.7■■■□□ 2.35
GDNF-204ENST00000427982 ARXQ96QS3 562 aa29.7■■■□□ 2.35
GDNF-204ENST00000427982 PIGBQ92521 554 aa29.66■■■□□ 2.34
GDNF-204ENST00000427982 KIF7Q2M1P5 1343 aa29.66■■■□□ 2.34
GDNF-204ENST00000427982 PHKG2P15735 406 aa29.65■■■□□ 2.34
GDNF-204ENST00000427982 DCAF8L1A6NGE4 600 aa29.63■■■□□ 2.33
GDNF-204ENST00000427982 COL23A1Q86Y22 540 aaPredicted RBP29.63■■■□□ 2.33
GDNF-204ENST00000427982 AMER1Q5JTC6 1135 aaPredicted RBP29.62■■■□□ 2.33
GDNF-204ENST00000427982 MORC1Q86VD1 984 aa29.62■■■□□ 2.33
GDNF-204ENST00000427982 IFNL2Q8IZJ0 200 aa29.62■■■□□ 2.33
GDNF-204ENST00000427982 SMARCC1Q92922 1105 aaPredicted RBP29.62■■■□□ 2.33
GDNF-204ENST00000427982 GOLGB1Q14789 3259 aaKnown RBP29.62■■■□□ 2.33
GDNF-204ENST00000427982 ZNF831Q5JPB2 1677 aa29.61■■■□□ 2.33
GDNF-204ENST00000427982 YY1P25490 414 aa29.61■■■□□ 2.33
GDNF-204ENST00000427982 KNSTRNQ9Y448 316 aa29.61■■■□□ 2.33
GDNF-204ENST00000427982 VIRMAQ69YN4 1812 aaKnown RBP29.61■■■□□ 2.33
GDNF-204ENST00000427982 POLD1P28340 1107 aa29.57■■■□□ 2.32
GDNF-204ENST00000427982 SCN11AQ9UI33 1791 aa29.57■■■□□ 2.32
GDNF-204ENST00000427982 COL5A3P25940 1745 aaPredicted RBP29.57■■■□□ 2.32
GDNF-204ENST00000427982 HMGB2P26583 209 aaKnown RBP29.56■■■□□ 2.32
GDNF-204ENST00000427982 TMOD3Q9NYL9 352 aa29.56■■■□□ 2.32
GDNF-204ENST00000427982 KDRP35968 1356 aa29.55■■■□□ 2.32
GDNF-204ENST00000427982 PER1O15534 1290 aaPredicted RBP29.55■■■□□ 2.32
GDNF-204ENST00000427982 AMIGO3Q86WK7 504 aa29.54■■■□□ 2.32
GDNF-204ENST00000427982 ASAP1Q9ULH1 1129 aa29.54■■■□□ 2.32
GDNF-204ENST00000427982 KDM6AO15550 1401 aaPredicted RBP29.54■■■□□ 2.32
GDNF-204ENST00000427982 LOC102724428A0A0B4J2F2 783 aa29.53■■■□□ 2.32
GDNF-204ENST00000427982 SIK1P57059 783 aa29.53■■■□□ 2.32
GDNF-204ENST00000427982 AEBP1Q8IUX7 1158 aa29.53■■■□□ 2.32
GDNF-204ENST00000427982 FLAD1Q8NFF5 587 aa29.52■■■□□ 2.32
GDNF-204ENST00000427982 ATG3Q9NT62 314 aa29.51■■■□□ 2.31
GDNF-204ENST00000427982 MSH5O43196 834 aa29.5■■■□□ 2.31
GDNF-204ENST00000427982 IL13P35225 146 aa29.5■■■□□ 2.31
GDNF-204ENST00000427982 PLEKHO1Q53GL0 409 aaPredicted RBP29.5■■■□□ 2.31
GDNF-204ENST00000427982 LINC00116Q8NCU8 138 aa29.5■■■□□ 2.31
GDNF-204ENST00000427982 ERVV-2B6SEH9 535 aa29.49■■■□□ 2.31
GDNF-204ENST00000427982 DCAF5Q96JK2 942 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms