RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
CTNND1-207ENST00000426142 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-207ENST00000426142 ABCF2Q9UG63 623 aa9.42□□□□□ -0.9
CTNND1-207ENST00000426142 PHF8Q9UPP1 1060 aa9.42□□□□□ -0.9
CTNND1-207ENST00000426142 HSP90AA2PQ14568 343 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-207ENST00000426142 ZSCAN25Q6NSZ9 544 aa9.42□□□□□ -0.9
CTNND1-207ENST00000426142 ZHX3Q9H4I2 956 aa9.42□□□□□ -0.9
CTNND1-207ENST00000426142 F6X3S4 739 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 PDCP20941 246 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 TXLNAP40222 546 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 MCM2P49736 904 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 GPS2Q13227 327 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 METTL24Q5JXM2 366 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-207ENST00000426142 PDRG1Q9NUG6 133 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
CTNND1-207ENST00000426142 NOS1P29475 1434 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 ME1P48163 572 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 MNS1Q8NEH6 495 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 TSPY26PQ9H489 355 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 ZPR1O75312 459 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-207ENST00000426142 BLOC1S2Q6QNY1 142 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
CTNND1-207ENST00000426142 TAF7Q15545 349 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-207ENST00000426142 LARP1BQ659C4 914 aaKnown RBP9.4□□□□□ -0.91
CTNND1-207ENST00000426142 SPC24Q8NBT2 197 aa9.4□□□□□ -0.91
CTNND1-207ENST00000426142 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-207ENST00000426142 ANKRD1Q15327 319 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 UBAC1Q9BSL1 405 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■■■■ 38.5
CTNND1-207ENST00000426142 MAGEC2Q9UBF1 373 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-207ENST00000426142 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
CTNND1-207ENST00000426142 FBLN1P23142 703 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 SOGA3Q5TF21 947 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 MPNDQ8N594 471 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 ZNF219Q9P2Y4 722 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-207ENST00000426142 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 CAGE1Q8TC20 777 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 C20orf194Q5TEA3 1177 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 FANCAO15360 1455 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 BOLA2Q9H3K6 86 aa9.39□□□□□ -0.91
CTNND1-207ENST00000426142 USP5P45974 858 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 KRT28Q7Z3Y7 464 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
CTNND1-207ENST00000426142 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-207ENST00000426142 NGLY1Q96IV0 654 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 URB2Q14146 1524 aaKnown RBP9.38□□□□□ -0.91
CTNND1-207ENST00000426142 BICRAQ9NZM4 1560 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-207ENST00000426142 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 CCDC39Q9UFE4 941 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 GPTP24298 496 aa9.38□□□□□ -0.91
CTNND1-207ENST00000426142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNND1-207ENST00000426142 MBD3O95983 291 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 MRE11P49959 708 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 BACH2Q9BYV9 841 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 ZNF771Q7L3S4 317 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 AEBP1Q8IUX7 1158 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 RUFY1Q96T51 708 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 CCDC8Q9H0W5 538 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.911e-7■■■■■ 26.8
CTNND1-207ENST00000426142 FILIP1LQ4L180 1135 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 ZBTB3Q9H5J0 574 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 TRMT112Q9UI30 125 aaKnown RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 ZNF652Q9Y2D9 606 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 MINDY4BA8MYZ0 360 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 SKIDA1Q1XH10 827 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 TNMDQ9H2S6 317 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 MX1P20591 662 aa9.37□□□□□ -0.91
CTNND1-207ENST00000426142 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-207ENST00000426142 SERPINC1P01008 464 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 IMMTQ16891 758 aaKnown RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 WWC2Q6AWC2 1192 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 WDR33Q9C0J8 1336 aaKnown RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 CAVIN4Q5BKX8 364 aa9.36□□□□□ -0.91
CTNND1-207ENST00000426142 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-207ENST00000426142 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
CTNND1-207ENST00000426142 KRT85P78386 507 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
CTNND1-207ENST00000426142 IBSPP21815 317 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms