RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
UBR4-207ENST00000425413 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
UBR4-207ENST00000425413 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
UBR4-207ENST00000425413 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.08
UBR4-207ENST00000425413 HOXC9P31274 260 aa14.52□□□□□ -0.09
UBR4-207ENST00000425413 G2E3Q7L622 706 aa14.52□□□□□ -0.09
UBR4-207ENST00000425413 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
UBR4-207ENST00000425413 NRKQ7Z2Y5 1582 aa14.51□□□□□ -0.09
UBR4-207ENST00000425413 BECN1Q14457 450 aa14.51□□□□□ -0.09
UBR4-207ENST00000425413 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
UBR4-207ENST00000425413 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
UBR4-207ENST00000425413 TOPAZ1Q8N9V7 1692 aa14.5□□□□□ -0.09
UBR4-207ENST00000425413 PSME1Q06323 249 aa14.5□□□□□ -0.09
UBR4-207ENST00000425413 RIMS1Q86UR5 1692 aaKnown RBP14.5□□□□□ -0.09
UBR4-207ENST00000425413 CEP170BQ9Y4F5 1589 aaPredicted RBP14.5□□□□□ -0.09
UBR4-207ENST00000425413 MEIS3Q99687 375 aa14.49□□□□□ -0.09
UBR4-207ENST00000425413 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
UBR4-207ENST00000425413 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
UBR4-207ENST00000425413 IGSF1Q8N6C5 1336 aa14.49□□□□□ -0.09
UBR4-207ENST00000425413 C16orf71Q8IYS4 520 aaPredicted RBP14.49□□□□□ -0.09
UBR4-207ENST00000425413 CHMP4BQ9H444 224 aaKnown RBP14.49□□□□□ -0.09
UBR4-207ENST00000425413 CRB1P82279 1406 aa14.48□□□□□ -0.09
UBR4-207ENST00000425413 GAS2L2Q8NHY3 880 aa14.48□□□□□ -0.09
UBR4-207ENST00000425413 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
UBR4-207ENST00000425413 SMARCA5O60264 1052 aaPredicted RBP14.47□□□□□ -0.09
UBR4-207ENST00000425413 ORAI2Q96SN7 254 aa14.47□□□□□ -0.09
UBR4-207ENST00000425413 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
UBR4-207ENST00000425413 MSH6P52701 1360 aa14.47□□□□□ -0.09
UBR4-207ENST00000425413 GNAT3A8MTJ3 354 aa14.46□□□□□ -0.09
UBR4-207ENST00000425413 OTUD7AQ8TE49 926 aaPredicted RBP14.46□□□□□ -0.09
UBR4-207ENST00000425413 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.09
UBR4-207ENST00000425413 INTS3Q68E01 1043 aaKnown RBP14.46□□□□□ -0.1
UBR4-207ENST00000425413 IL17REQ8NFR9 667 aa14.46□□□□□ -0.1
UBR4-207ENST00000425413 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
UBR4-207ENST00000425413 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
UBR4-207ENST00000425413 STK31Q9BXU1 1019 aa14.44□□□□□ -0.1
UBR4-207ENST00000425413 FKBP5Q13451 457 aaPredicted RBP14.44□□□□□ -0.1
UBR4-207ENST00000425413 NBPF6Q5VWK0 638 aa14.44□□□□□ -0.1
UBR4-207ENST00000425413 NBPF4Q96M43 638 aa14.44□□□□□ -0.1
UBR4-207ENST00000425413 KDRP35968 1356 aa14.44□□□□□ -0.1
UBR4-207ENST00000425413 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
UBR4-207ENST00000425413 VIRMAQ69YN4 1812 aaKnown RBP14.43□□□□□ -0.1
UBR4-207ENST00000425413 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
UBR4-207ENST00000425413 CEP85Q6P2H3 762 aa14.43□□□□□ -0.1
UBR4-207ENST00000425413 RGS12O14924 1447 aa14.43□□□□□ -0.1
UBR4-207ENST00000425413 BMP2KLQ5H9B9 411 aa14.43□□□□□ -0.1
UBR4-207ENST00000425413 NALCNQ8IZF0 1738 aa14.42□□□□□ -0.1
UBR4-207ENST00000425413 ANKARQ7Z5J8 1434 aa14.42□□□□□ -0.1
UBR4-207ENST00000425413 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
UBR4-207ENST00000425413 TBC1D9Q6ZT07 1266 aa14.42□□□□□ -0.1
UBR4-207ENST00000425413 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
UBR4-207ENST00000425413 PTPRCP08575 1304 aa14.41□□□□□ -0.1
UBR4-207ENST00000425413 XRN1Q8IZH2 1706 aaKnown RBP14.41□□□□□ -0.1
UBR4-207ENST00000425413 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
UBR4-207ENST00000425413 LGR6Q9HBX8 967 aa14.41□□□□□ -0.1
UBR4-207ENST00000425413 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
UBR4-207ENST00000425413 GSPT1P15170 499 aaKnown RBP14.4□□□□□ -0.1
UBR4-207ENST00000425413 FLIIQ13045 1269 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 PLEKHM2Q8IWE5 1019 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 RTL1A6NKG5 1358 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 IL27Q8NEV9 243 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 TAF7Q15545 349 aaPredicted RBP14.4□□□□□ -0.1
UBR4-207ENST00000425413 PROSER2Q86WR7 435 aaPredicted RBP14.4□□□□□ -0.1
UBR4-207ENST00000425413 IP6K1Q92551 441 aa14.4□□□□□ -0.1
UBR4-207ENST00000425413 MAP3K5Q99683 1374 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 TSHZ3Q63HK5 1081 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 MPRIPQ6WCQ1 1025 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 EXOC6BQ9Y2D4 811 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 KCNQ3O43525 872 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 ANXA1P04083 346 aa14.39□□□□□ -0.11
UBR4-207ENST00000425413 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
UBR4-207ENST00000425413 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
UBR4-207ENST00000425413 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
UBR4-207ENST00000425413 PHAXQ9H814 394 aaKnown RBP14.38□□□□□ -0.11
UBR4-207ENST00000425413 ATP10DQ9P241 1426 aa14.38□□□□□ -0.11
UBR4-207ENST00000425413 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
UBR4-207ENST00000425413 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
UBR4-207ENST00000425413 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
UBR4-207ENST00000425413 GSE1Q14687 1217 aa14.37□□□□□ -0.11
UBR4-207ENST00000425413 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
UBR4-207ENST00000425413 GCP02774 474 aa14.37□□□□□ -0.11
UBR4-207ENST00000425413 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
UBR4-207ENST00000425413 ZNF530Q6P9A1 599 aaPredicted RBP14.37□□□□□ -0.11
UBR4-207ENST00000425413 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
UBR4-207ENST00000425413 CCT4P50991 539 aaKnown RBP14.36□□□□□ -0.11
UBR4-207ENST00000425413 CDC45O75419 566 aa14.35□□□□□ -0.11
UBR4-207ENST00000425413 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
UBR4-207ENST00000425413 ARXQ96QS3 562 aa14.35□□□□□ -0.11
UBR4-207ENST00000425413 KIF24Q5T7B8 1368 aa14.35□□□□□ -0.11
UBR4-207ENST00000425413 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
UBR4-207ENST00000425413 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
UBR4-207ENST00000425413 GNAI2P04899 355 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 TEFQ10587 303 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 TTC22Q5TAA0 569 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
UBR4-207ENST00000425413 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
UBR4-207ENST00000425413 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms