RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 NUP133Q8WUM0 1156 aa9.33□□□□□ -0.92
PUM1-205ENST00000424085 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
PUM1-205ENST00000424085 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
PUM1-205ENST00000424085 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
PUM1-205ENST00000424085 NOL7Q9UMY1 257 aaKnown RBP9.33□□□□□ -0.92
PUM1-205ENST00000424085 CHMP4BP1P59074 171 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 STIM1Q13586 685 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 STK38Q15208 465 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 IDH1O75874 414 aaKnown RBP9.32□□□□□ -0.92
PUM1-205ENST00000424085 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 UGGT2Q9NYU1 1516 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.923e-7■□□□□ 8.1
PUM1-205ENST00000424085 METTL24Q5JXM2 366 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
PUM1-205ENST00000424085 TSR2Q969E8 191 aaKnown RBP9.32□□□□□ -0.92
PUM1-205ENST00000424085 CCDC85AQ96PX6 553 aaPredicted RBP9.32□□□□□ -0.92
PUM1-205ENST00000424085 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
PUM1-205ENST00000424085 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
PUM1-205ENST00000424085 AMOTQ4VCS5 1084 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 NEBLO76041 1014 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 USP5P45974 858 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 MCM2P49736 904 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 FAM43AQ8N2R8 423 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 ZNF396Q96N95 335 aaPredicted RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 DUSP27Q5VZP5 1158 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 PPP4R3AQ6IN85 833 aa9.31□□□□□ -0.92
PUM1-205ENST00000424085 THOC2Q8NI27 1593 aaKnown RBP9.31□□□□□ -0.92
PUM1-205ENST00000424085 CDKL5O76039 1030 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■□□ 14.6
PUM1-205ENST00000424085 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 DZIP1Q86YF9 867 aaKnown RBP9.3□□□□□ -0.92
PUM1-205ENST00000424085 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
PUM1-205ENST00000424085 AKAP2Q9Y2D5 859 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 LAMC3Q9Y6N6 1575 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 SETQ01105 290 aaPredicted RBP9.3□□□□□ -0.92
PUM1-205ENST00000424085 MKNK2Q9HBH9 465 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 RRS1Q15050 365 aaKnown RBP9.3□□□□□ -0.92
PUM1-205ENST00000424085 ANKRD1Q15327 319 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 C16orf71Q8IYS4 520 aaPredicted RBP9.3□□□□□ -0.92
PUM1-205ENST00000424085 PDILTQ8N807 584 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 SMARCE1Q969G3 411 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 FEZ1Q99689 392 aa9.3□□□□□ -0.92
PUM1-205ENST00000424085 URB2Q14146 1524 aaKnown RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 GNAT3A8MTJ3 354 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 PPM1FP49593 454 aaPredicted RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 LRRCC1Q9C099 1032 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 ZNHIT6Q9NWK9 470 aaKnown RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 NEK4P51957 841 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 TEX13AQ9BXU3 409 aaPredicted RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 ACBD3Q9H3P7 528 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
PUM1-205ENST00000424085 GCC1Q96CN9 775 aa9.29□□□□□ -0.92
PUM1-205ENST00000424085 POLD1P28340 1107 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 AACSQ86V21 672 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 MNS1Q8NEH6 495 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
PUM1-205ENST00000424085 CYP46A1Q9Y6A2 500 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 MYO1BO43795 1136 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.923e-8■■□□□ 11.6
PUM1-205ENST00000424085 CFAP43Q8NDM7 1665 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
PUM1-205ENST00000424085 RFC4P35249 363 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 LDHCP07864 332 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
PUM1-205ENST00000424085 CAGE1Q8TC20 777 aa9.28□□□□□ -0.92
PUM1-205ENST00000424085 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.92
PUM1-205ENST00000424085 IFIT5Q13325 482 aaKnown RBP9.27□□□□□ -0.92
PUM1-205ENST00000424085 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.92
PUM1-205ENST00000424085 SEC63Q9UGP8 760 aaKnown RBP9.27□□□□□ -0.92
PUM1-205ENST00000424085 FCHSD2O94868 740 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 MCM4P33991 863 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 GRM1Q13255 1194 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.93
PUM1-205ENST00000424085 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 CCDC97Q96F63 343 aaPredicted RBP9.27□□□□□ -0.93
PUM1-205ENST00000424085 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 MSH6P52701 1360 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 NEFHP12036 1026 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
PUM1-205ENST00000424085 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
PUM1-205ENST00000424085 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 FAM13BQ9NYF5 915 aa9.27□□□□□ -0.93
PUM1-205ENST00000424085 TCOF1Q13428 1488 aaKnown RBP9.26□□□□□ -0.93
PUM1-205ENST00000424085 DISP3Q9P2K9 1392 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 243.2 ms