RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 GNAI1P63096 354 aa18.72■□□□□ 0.59
SSX2IP-202ENST00000422026 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
SSX2IP-202ENST00000422026 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
SSX2IP-202ENST00000422026 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
SSX2IP-202ENST00000422026 BTG4Q9NY30 223 aa18.71■□□□□ 0.59
SSX2IP-202ENST00000422026 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
SSX2IP-202ENST00000422026 NWD2Q9ULI1 1742 aa18.71■□□□□ 0.59
SSX2IP-202ENST00000422026 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 NEFLP07196 543 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 RCAN3Q9UKA8 241 aa18.7■□□□□ 0.58
SSX2IP-202ENST00000422026 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
SSX2IP-202ENST00000422026 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
SSX2IP-202ENST00000422026 STRN4Q9NRL3 753 aa18.69■□□□□ 0.58
SSX2IP-202ENST00000422026 LRRC37A3O60309 1634 aa18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 ADAMTS2O95450 1211 aa18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 MEGF6O75095 1541 aa18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
SSX2IP-202ENST00000422026 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 SLIT2O94813 1529 aa18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 HSPA1LP34931 641 aa18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 LARP1Q6PKG0 1096 aaKnown RBP18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
SSX2IP-202ENST00000422026 HSP90AB1P08238 724 aaKnown RBP18.65■□□□□ 0.58
SSX2IP-202ENST00000422026 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
SSX2IP-202ENST00000422026 IL2RBP14784 551 aa18.65■□□□□ 0.58
SSX2IP-202ENST00000422026 MCM10Q7L590 875 aa18.64■□□□□ 0.57
SSX2IP-202ENST00000422026 CDCA7Q9BWT1 371 aaPredicted RBP18.64■□□□□ 0.57
SSX2IP-202ENST00000422026 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
SSX2IP-202ENST00000422026 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 LAS1LQ9Y4W2 734 aaKnown RBP18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
SSX2IP-202ENST00000422026 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
SSX2IP-202ENST00000422026 ADAMTS7Q9UKP4 1686 aa18.61■□□□□ 0.57
SSX2IP-202ENST00000422026 CHL1O00533 1208 aa18.61■□□□□ 0.57
SSX2IP-202ENST00000422026 MSH5O43196 834 aa18.61■□□□□ 0.57
SSX2IP-202ENST00000422026 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
SSX2IP-202ENST00000422026 PHKG2P15735 406 aa18.6■□□□□ 0.57
SSX2IP-202ENST00000422026 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
SSX2IP-202ENST00000422026 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
SSX2IP-202ENST00000422026 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
SSX2IP-202ENST00000422026 DISP2A7MBM2 1401 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 TEFQ10587 303 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 GTF3C3Q9Y5Q9 886 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 LRP6O75581 1613 aa18.59■□□□□ 0.57
SSX2IP-202ENST00000422026 WNK3Q9BYP7 1800 aa18.58■□□□□ 0.57
SSX2IP-202ENST00000422026 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.57
SSX2IP-202ENST00000422026 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 RRP1P56182 461 aaKnown RBP18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 FNBP4Q8N3X1 1017 aaPredicted RBP18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 DCAF5Q96JK2 942 aa18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 C8orf37Q96NL8 207 aa18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
SSX2IP-202ENST00000422026 SPATA31A1Q5TZJ5 1347 aa18.57■□□□□ 0.56
SSX2IP-202ENST00000422026 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
SSX2IP-202ENST00000422026 ERICH6BQ5W0A0 696 aa18.57■□□□□ 0.56
SSX2IP-202ENST00000422026 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
SSX2IP-202ENST00000422026 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
SSX2IP-202ENST00000422026 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
SSX2IP-202ENST00000422026 MRC1P22897 1456 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 VPS72Q15906 364 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
SSX2IP-202ENST00000422026 CYP27B1O15528 508 aa18.54■□□□□ 0.56
SSX2IP-202ENST00000422026 RARSP54136 660 aaKnown RBP18.54■□□□□ 0.56
SSX2IP-202ENST00000422026 CHMP4AQ9BY43 222 aa18.54■□□□□ 0.56
SSX2IP-202ENST00000422026 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 KDM6AO15550 1401 aaPredicted RBP18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 TNS2Q63HR2 1409 aa18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
SSX2IP-202ENST00000422026 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
SSX2IP-202ENST00000422026 USP21Q9UK80 565 aa18.52■□□□□ 0.56
SSX2IP-202ENST00000422026 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
SSX2IP-202ENST00000422026 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
SSX2IP-202ENST00000422026 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
SSX2IP-202ENST00000422026 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms