RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
LINC01646-201ENST00000420522 ZNF697Q5TEC3 545 aa7.78□□□□□ -1.16
LINC01646-201ENST00000420522 FAM200AQ8TCP9 573 aa7.78□□□□□ -1.16
LINC01646-201ENST00000420522 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
LINC01646-201ENST00000420522 KIAA1024Q9UPX6 916 aa7.78□□□□□ -1.16
LINC01646-201ENST00000420522 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
LINC01646-201ENST00000420522 ZBTB7CA1YPR0 619 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 BRD1O95696 1058 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 MYCP01106 439 aaPredicted RBP7.77□□□□□ -1.17
LINC01646-201ENST00000420522 SCTRP47872 440 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 PKD2L1Q9P0L9 805 aa7.77□□□□□ -1.17
LINC01646-201ENST00000420522 FAM69CQ0P6D2 419 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 DPYDQ12882 1025 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 CC2D2BQ6DHV5 1058 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 AEBP1Q8IUX7 1158 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 TRIM52Q96A61 297 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 TMPRSS4Q9NRS4 437 aa7.76□□□□□ -1.17
LINC01646-201ENST00000420522 NR3C2P08235 984 aa7.75□□□□□ -1.17
LINC01646-201ENST00000420522 FOXC1Q12948 553 aa7.75□□□□□ -1.17
LINC01646-201ENST00000420522 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
LINC01646-201ENST00000420522 CCDC102BQ68D86 513 aa7.75□□□□□ -1.17
LINC01646-201ENST00000420522 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
LINC01646-201ENST00000420522 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
LINC01646-201ENST00000420522 TPCN2Q8NHX9 752 aa7.74□□□□□ -1.17
LINC01646-201ENST00000420522 SNIP1Q8TAD8 396 aaKnown RBP7.74□□□□□ -1.17
LINC01646-201ENST00000420522 ESF1Q9H501 851 aaKnown RBP7.74□□□□□ -1.17
LINC01646-201ENST00000420522 CYLDQ9NQC7 956 aa7.74□□□□□ -1.17
LINC01646-201ENST00000420522 LILRA1O75019 489 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 SEC13P55735 322 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 MYT1Q01538 1121 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 PSME1Q06323 249 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
LINC01646-201ENST00000420522 OSBPL3Q9H4L5 887 aa7.73□□□□□ -1.17
LINC01646-201ENST00000420522 RBM19Q9Y4C8 960 aaKnown RBP7.73□□□□□ -1.17
LINC01646-201ENST00000420522 SFI1A8K8P3 1242 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 PATL2C9JE40 543 aaKnown RBP7.72□□□□□ -1.17
LINC01646-201ENST00000420522 GDF9O60383 454 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 KCNA1Q09470 495 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 PODXL2Q9NZ53 605 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
LINC01646-201ENST00000420522 NNTQ13423 1086 aa7.71□□□□□ -1.18
LINC01646-201ENST00000420522 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
LINC01646-201ENST00000420522 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
LINC01646-201ENST00000420522 M0R2N6 131 aa7.7□□□□□ -1.18
LINC01646-201ENST00000420522 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
LINC01646-201ENST00000420522 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
LINC01646-201ENST00000420522 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 WASLO00401 505 aaPredicted RBP7.69□□□□□ -1.18
LINC01646-201ENST00000420522 SSFA2P28290 1259 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 SCNN1DP51172 638 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 CYP2U1Q7Z449 544 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 KLF16Q9BXK1 252 aaPredicted RBP7.69□□□□□ -1.18
LINC01646-201ENST00000420522 ZNF358Q9NW07 568 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 TOR4AQ9NXH8 423 aa7.69□□□□□ -1.18
LINC01646-201ENST00000420522 TTC24A2A3L6 582 aaPredicted RBP7.68□□□□□ -1.18
LINC01646-201ENST00000420522 J3QL48 77 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 TNFRSF10AO00220 468 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 GNRH1P01148 92 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 PRR20EP86478 221 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 PRR20CP86479 221 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 PRR20DP86480 221 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 PRR20BP86481 221 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 PRR20AP86496 221 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 TRIM67Q6ZTA4 783 aa7.68□□□□□ -1.18
LINC01646-201ENST00000420522 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC01646-201ENST00000420522 STAU1O95793 577 aaKnown RBP7.67□□□□□ -1.18
LINC01646-201ENST00000420522 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
LINC01646-201ENST00000420522 GDF10P55107 478 aa7.67□□□□□ -1.18
LINC01646-201ENST00000420522 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
LINC01646-201ENST00000420522 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
LINC01646-201ENST00000420522 INHAP05111 366 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 SMPD1P17405 629 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 OCLNQ16625 522 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 Q6ZVU0 165 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 HINFPQ9BQA5 517 aa7.66□□□□□ -1.18
LINC01646-201ENST00000420522 GNEQ9Y223 722 aaKnown RBP7.66□□□□□ -1.18
LINC01646-201ENST00000420522 BACH1O14867 736 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 PRMT3O60678 531 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 ADH1AP07327 375 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 KDF1Q8NAX2 398 aaPredicted RBP7.65□□□□□ -1.18
LINC01646-201ENST00000420522 C1orf216Q8TAB5 229 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 SLC4A9Q96Q91 983 aa7.65□□□□□ -1.18
LINC01646-201ENST00000420522 RGS20O76081 388 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 ZIC2O95409 532 aaPredicted RBP7.64□□□□□ -1.19
LINC01646-201ENST00000420522 TIMP2P16035 220 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 WEE1P30291 646 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 WDR4P57081 412 aaKnown RBP7.64□□□□□ -1.19
LINC01646-201ENST00000420522 CBLBQ13191 982 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 TXNDC2Q86VQ3 553 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
LINC01646-201ENST00000420522 GZF1Q9H116 711 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms