RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
CPNE1-209ENST00000415920 FHDC1Q9C0D6 1143 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-209ENST00000415920 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
CPNE1-209ENST00000415920 FBLN1P23142 703 aa18.54■□□□□ 0.56
CPNE1-209ENST00000415920 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
CPNE1-209ENST00000415920 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-209ENST00000415920 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-209ENST00000415920 LTV1Q96GA3 475 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-209ENST00000415920 SYT17Q9BSW7 474 aa18.53■□□□□ 0.56
CPNE1-209ENST00000415920 MTFR1LQ9H019 292 aa18.53■□□□□ 0.56
CPNE1-209ENST00000415920 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
CPNE1-209ENST00000415920 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
CPNE1-209ENST00000415920 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
CPNE1-209ENST00000415920 COG3Q96JB2 828 aa18.52■□□□□ 0.56
CPNE1-209ENST00000415920 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
CPNE1-209ENST00000415920 FYB1O15117 783 aa18.51■□□□□ 0.55
CPNE1-209ENST00000415920 DOT1LQ8TEK3 1739 aa18.51■□□□□ 0.55
CPNE1-209ENST00000415920 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
CPNE1-209ENST00000415920 KCNQ4P56696 695 aa18.5■□□□□ 0.55
CPNE1-209ENST00000415920 IP6K1Q92551 441 aa18.5■□□□□ 0.55
CPNE1-209ENST00000415920 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
CPNE1-209ENST00000415920 MAP3K19Q56UN5 1328 aa18.49■□□□□ 0.55
CPNE1-209ENST00000415920 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
CPNE1-209ENST00000415920 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
CPNE1-209ENST00000415920 ARXQ96QS3 562 aa18.47■□□□□ 0.55
CPNE1-209ENST00000415920 MEGF6O75095 1541 aa18.47■□□□□ 0.55
CPNE1-209ENST00000415920 UTRNP46939 3433 aa18.46■□□□□ 0.55
CPNE1-209ENST00000415920 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
CPNE1-209ENST00000415920 HOXC9P31274 260 aa18.46■□□□□ 0.55
CPNE1-209ENST00000415920 TNNT2P45379 298 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-209ENST00000415920 ZNF784Q8NCA9 323 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-209ENST00000415920 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
CPNE1-209ENST00000415920 LY75O60449 1722 aa18.45■□□□□ 0.54
CPNE1-209ENST00000415920 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
CPNE1-209ENST00000415920 CHD4Q14839 1912 aa18.44■□□□□ 0.54
CPNE1-209ENST00000415920 PNPLA7Q6ZV29 1317 aa18.44■□□□□ 0.54
CPNE1-209ENST00000415920 PRIM1P49642 420 aaKnown RBP18.43■□□□□ 0.54
CPNE1-209ENST00000415920 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-209ENST00000415920 ANP32CO43423 234 aa18.42■□□□□ 0.54
CPNE1-209ENST00000415920 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
CPNE1-209ENST00000415920 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
CPNE1-209ENST00000415920 AMPHP49418 695 aa18.41■□□□□ 0.54
CPNE1-209ENST00000415920 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
CPNE1-209ENST00000415920 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
CPNE1-209ENST00000415920 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
CPNE1-209ENST00000415920 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
CPNE1-209ENST00000415920 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
CPNE1-209ENST00000415920 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
CPNE1-209ENST00000415920 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-209ENST00000415920 RALBP1Q15311 655 aa18.38■□□□□ 0.53
CPNE1-209ENST00000415920 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
CPNE1-209ENST00000415920 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
CPNE1-209ENST00000415920 NLGN2Q8NFZ4 835 aa18.37■□□□□ 0.53
CPNE1-209ENST00000415920 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
CPNE1-209ENST00000415920 TFCP2L1Q9NZI6 479 aa18.36■□□□□ 0.53
CPNE1-209ENST00000415920 EMILIN1Q9Y6C2 1016 aa18.36■□□□□ 0.53
CPNE1-209ENST00000415920 FLT4P35916 1363 aa18.35■□□□□ 0.53
CPNE1-209ENST00000415920 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-209ENST00000415920 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
CPNE1-209ENST00000415920 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-209ENST00000415920 GPR162Q16538 588 aa18.34■□□□□ 0.53
CPNE1-209ENST00000415920 SLC16A10Q8TF71 515 aa18.34■□□□□ 0.53
CPNE1-209ENST00000415920 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
CPNE1-209ENST00000415920 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.53
CPNE1-209ENST00000415920 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
CPNE1-209ENST00000415920 COL23A1Q86Y22 540 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-209ENST00000415920 C5P01031 1676 aa18.33■□□□□ 0.52
CPNE1-209ENST00000415920 POLD1P28340 1107 aa18.32■□□□□ 0.52
CPNE1-209ENST00000415920 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
CPNE1-209ENST00000415920 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
CPNE1-209ENST00000415920 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
CPNE1-209ENST00000415920 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
CPNE1-209ENST00000415920 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
CPNE1-209ENST00000415920 ITGB4P16144 1822 aa18.29■□□□□ 0.52
CPNE1-209ENST00000415920 MTHFSP49914 203 aa18.29■□□□□ 0.52
CPNE1-209ENST00000415920 INSRP06213 1382 aa18.29■□□□□ 0.52
CPNE1-209ENST00000415920 MSH5O43196 834 aa18.28■□□□□ 0.52
CPNE1-209ENST00000415920 YBX3P16989 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPNE1-209ENST00000415920 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
CPNE1-209ENST00000415920 PKD1L3Q7Z443 1732 aa18.27■□□□□ 0.52
CPNE1-209ENST00000415920 CYP27B1O15528 508 aa18.27■□□□□ 0.52
CPNE1-209ENST00000415920 TATP17735 454 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-209ENST00000415920 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
CPNE1-209ENST00000415920 CFAP53Q96M91 514 aa18.27■□□□□ 0.52
CPNE1-209ENST00000415920 C1QTNF8P60827 252 aa18.26■□□□□ 0.51
CPNE1-209ENST00000415920 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
CPNE1-209ENST00000415920 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
CPNE1-209ENST00000415920 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
CPNE1-209ENST00000415920 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
CPNE1-209ENST00000415920 MPRIPQ6WCQ1 1025 aa18.25■□□□□ 0.51
CPNE1-209ENST00000415920 PCDH11XQ9BZA7 1347 aa18.24■□□□□ 0.51
CPNE1-209ENST00000415920 PCDH11YQ9BZA8 1340 aa18.24■□□□□ 0.51
CPNE1-209ENST00000415920 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
CPNE1-209ENST00000415920 MIER1Q8N108 512 aa18.24■□□□□ 0.51
CPNE1-209ENST00000415920 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
CPNE1-209ENST00000415920 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
CPNE1-209ENST00000415920 NCAPD2Q15021 1401 aa18.22■□□□□ 0.51
CPNE1-209ENST00000415920 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
CPNE1-209ENST00000415920 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
CPNE1-209ENST00000415920 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms