RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 PARD3Q8TEW0 1356 aa15.1■□□□□ 0.01
A1CF-208ENST00000414883 POLKQ9UBT6 870 aa15.09■□□□□ 0.01
A1CF-208ENST00000414883 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
A1CF-208ENST00000414883 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0
A1CF-208ENST00000414883 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
A1CF-208ENST00000414883 NSD2O96028 1365 aa15.07■□□□□ 0
A1CF-208ENST00000414883 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
A1CF-208ENST00000414883 BTAF1O14981 1849 aa15.06■□□□□ 0
A1CF-208ENST00000414883 PER1O15534 1290 aaPredicted RBP15.06■□□□□ 0
A1CF-208ENST00000414883 KCNQ2O43526 872 aa15.06■□□□□ 0
A1CF-208ENST00000414883 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
A1CF-208ENST00000414883 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
A1CF-208ENST00000414883 PLSCR1O15162 318 aa15.05■□□□□ -0
A1CF-208ENST00000414883 PROM2Q8N271 834 aa15.05■□□□□ -0
A1CF-208ENST00000414883 PKD1L3Q7Z443 1732 aa15.05■□□□□ -0
A1CF-208ENST00000414883 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
A1CF-208ENST00000414883 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
A1CF-208ENST00000414883 TNNT2P45379 298 aaPredicted RBP15.03■□□□□ -0
A1CF-208ENST00000414883 ZCRB1Q8TBF4 217 aaKnown RBP15.02■□□□□ -0
A1CF-208ENST00000414883 LRP5O75197 1615 aa15.02□□□□□ -0.01
A1CF-208ENST00000414883 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
A1CF-208ENST00000414883 R3HDM1Q15032 1099 aaKnown RBP15.01□□□□□ -0.01
A1CF-208ENST00000414883 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
A1CF-208ENST00000414883 ACSBG1Q96GR2 724 aa15.01□□□□□ -0.01
A1CF-208ENST00000414883 EYA1Q99502 592 aa15.01□□□□□ -0.01
A1CF-208ENST00000414883 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
A1CF-208ENST00000414883 EIF4A2Q14240 407 aaKnown RBP15□□□□□ -0.01
A1CF-208ENST00000414883 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
A1CF-208ENST00000414883 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
A1CF-208ENST00000414883 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
A1CF-208ENST00000414883 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
A1CF-208ENST00000414883 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
A1CF-208ENST00000414883 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
A1CF-208ENST00000414883 LY75O60449 1722 aa14.97□□□□□ -0.01
A1CF-208ENST00000414883 ITGB4P16144 1822 aa14.97□□□□□ -0.01
A1CF-208ENST00000414883 CYP27B1O15528 508 aa14.97□□□□□ -0.01
A1CF-208ENST00000414883 TATP17735 454 aaPredicted RBP14.97□□□□□ -0.01
A1CF-208ENST00000414883 CASZ1Q86V15 1759 aa14.97□□□□□ -0.01
A1CF-208ENST00000414883 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
A1CF-208ENST00000414883 IGSF1Q8N6C5 1336 aa14.96□□□□□ -0.01
A1CF-208ENST00000414883 TXNRD1Q16881 649 aa14.96□□□□□ -0.01
A1CF-208ENST00000414883 PRIM1P49642 420 aaKnown RBP14.95□□□□□ -0.02
A1CF-208ENST00000414883 LRRC4BQ9NT99 713 aa14.94□□□□□ -0.02
A1CF-208ENST00000414883 UTRNP46939 3433 aa14.94□□□□□ -0.02
A1CF-208ENST00000414883 PCDH11XQ9BZA7 1347 aa14.93□□□□□ -0.02
A1CF-208ENST00000414883 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
A1CF-208ENST00000414883 PLEKHG2Q9H7P9 1386 aa14.93□□□□□ -0.02
A1CF-208ENST00000414883 IL13P35225 146 aa14.92□□□□□ -0.02
A1CF-208ENST00000414883 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
A1CF-208ENST00000414883 NBPF14Q5TI25 921 aa14.92□□□□□ -0.02
A1CF-208ENST00000414883 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
A1CF-208ENST00000414883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.024e-8■■■■□ 19.3
A1CF-208ENST00000414883 GOLGB1Q14789 3259 aaKnown RBP14.92□□□□□ -0.02
A1CF-208ENST00000414883 TUBGCP6Q96RT7 1819 aa14.92□□□□□ -0.02
A1CF-208ENST00000414883 COL3A1P02461 1466 aaPredicted RBP14.91□□□□□ -0.02
A1CF-208ENST00000414883 KDRP35968 1356 aa14.91□□□□□ -0.02
A1CF-208ENST00000414883 MTHFSP49914 203 aa14.91□□□□□ -0.02
A1CF-208ENST00000414883 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
A1CF-208ENST00000414883 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
A1CF-208ENST00000414883 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
A1CF-208ENST00000414883 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
A1CF-208ENST00000414883 PHKG2P15735 406 aa14.88□□□□□ -0.03
A1CF-208ENST00000414883 SLC15A2Q16348 729 aa14.88□□□□□ -0.03
A1CF-208ENST00000414883 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
A1CF-208ENST00000414883 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
A1CF-208ENST00000414883 SPG7Q9UQ90 795 aa14.88□□□□□ -0.03
A1CF-208ENST00000414883 KCNQ4P56696 695 aa14.87□□□□□ -0.03
A1CF-208ENST00000414883 SLC27A3Q5K4L6 730 aa14.87□□□□□ -0.03
A1CF-208ENST00000414883 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
A1CF-208ENST00000414883 PIGBQ92521 554 aa14.86□□□□□ -0.03
A1CF-208ENST00000414883 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
A1CF-208ENST00000414883 C5P01031 1676 aa14.85□□□□□ -0.03
A1CF-208ENST00000414883 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
A1CF-208ENST00000414883 COL24A1Q17RW2 1714 aa14.84□□□□□ -0.03
A1CF-208ENST00000414883 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
A1CF-208ENST00000414883 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
A1CF-208ENST00000414883 STK32BQ9NY57 414 aa14.84□□□□□ -0.03
A1CF-208ENST00000414883 VIRMAQ69YN4 1812 aaKnown RBP14.84□□□□□ -0.03
A1CF-208ENST00000414883 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.03
A1CF-208ENST00000414883 PALLDQ8WX93 1383 aa14.83□□□□□ -0.04
A1CF-208ENST00000414883 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
A1CF-208ENST00000414883 ADAMTS7Q9UKP4 1686 aa14.81□□□□□ -0.04
A1CF-208ENST00000414883 PTGER2P43116 358 aa14.81□□□□□ -0.04
A1CF-208ENST00000414883 AMOTQ4VCS5 1084 aa14.81□□□□□ -0.04
A1CF-208ENST00000414883 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
A1CF-208ENST00000414883 ZNF530Q6P9A1 599 aaPredicted RBP14.81□□□□□ -0.04
A1CF-208ENST00000414883 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
A1CF-208ENST00000414883 CCNL1Q9UK58 526 aaPredicted RBP14.81□□□□□ -0.04
A1CF-208ENST00000414883 ZBTB22O15209 634 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 DIAPH1O60610 1272 aaKnown RBP14.8□□□□□ -0.04
A1CF-208ENST00000414883 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 SPON1Q9HCB6 807 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 ZNF831Q5JPB2 1677 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 UBR3Q6ZT12 1888 aa14.8□□□□□ -0.04
A1CF-208ENST00000414883 HMOX1P09601 288 aa14.79□□□□□ -0.04
A1CF-208ENST00000414883 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
A1CF-208ENST00000414883 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
A1CF-208ENST00000414883 ERVV-2B6SEH9 535 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms