RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 COL18A1P39060 1754 aa13.44□□□□□ -0.26
AC003087.1-201ENST00000412828 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
AC003087.1-201ENST00000412828 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
AC003087.1-201ENST00000412828 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
AC003087.1-201ENST00000412828 WBP1LQ9NX94 342 aa13.42□□□□□ -0.26
AC003087.1-201ENST00000412828 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
AC003087.1-201ENST00000412828 SLIT3O75094 1523 aa13.41□□□□□ -0.26
AC003087.1-201ENST00000412828 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
AC003087.1-201ENST00000412828 TGFB2P61812 414 aa13.41□□□□□ -0.26
AC003087.1-201ENST00000412828 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
AC003087.1-201ENST00000412828 LY75O60449 1722 aa13.4□□□□□ -0.26
AC003087.1-201ENST00000412828 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
AC003087.1-201ENST00000412828 IL2RBP14784 551 aa13.4□□□□□ -0.26
AC003087.1-201ENST00000412828 NLRP6P59044 892 aa13.4□□□□□ -0.26
AC003087.1-201ENST00000412828 CNTNAP1P78357 1384 aa13.4□□□□□ -0.26
AC003087.1-201ENST00000412828 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
AC003087.1-201ENST00000412828 ITGAEP38570 1179 aa13.39□□□□□ -0.27
AC003087.1-201ENST00000412828 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
AC003087.1-201ENST00000412828 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
AC003087.1-201ENST00000412828 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
AC003087.1-201ENST00000412828 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
AC003087.1-201ENST00000412828 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
AC003087.1-201ENST00000412828 FCHSD2O94868 740 aa13.37□□□□□ -0.27
AC003087.1-201ENST00000412828 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
AC003087.1-201ENST00000412828 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
AC003087.1-201ENST00000412828 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
AC003087.1-201ENST00000412828 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
AC003087.1-201ENST00000412828 A0A0G2JLW4 131 aa13.35□□□□□ -0.27
AC003087.1-201ENST00000412828 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
AC003087.1-201ENST00000412828 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
AC003087.1-201ENST00000412828 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
AC003087.1-201ENST00000412828 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
AC003087.1-201ENST00000412828 TNRC18O15417 2968 aaPredicted RBP13.34□□□□□ -0.27
AC003087.1-201ENST00000412828 NSD2O96028 1365 aa13.33□□□□□ -0.27
AC003087.1-201ENST00000412828 USP47Q96K76 1375 aa13.33□□□□□ -0.27
AC003087.1-201ENST00000412828 VEGFBP49765 207 aa13.33□□□□□ -0.28
AC003087.1-201ENST00000412828 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
AC003087.1-201ENST00000412828 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
AC003087.1-201ENST00000412828 GLTPD2A6NH11 291 aa13.32□□□□□ -0.28
AC003087.1-201ENST00000412828 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
AC003087.1-201ENST00000412828 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
AC003087.1-201ENST00000412828 ERBB3P21860 1342 aa13.32□□□□□ -0.28
AC003087.1-201ENST00000412828 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
AC003087.1-201ENST00000412828 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
AC003087.1-201ENST00000412828 KIF13BQ9NQT8 1826 aa13.3□□□□□ -0.28
AC003087.1-201ENST00000412828 DPEP1P16444 411 aa13.3□□□□□ -0.28
AC003087.1-201ENST00000412828 C5P01031 1676 aa13.3□□□□□ -0.28
AC003087.1-201ENST00000412828 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
AC003087.1-201ENST00000412828 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
AC003087.1-201ENST00000412828 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
AC003087.1-201ENST00000412828 SMIM5Q71RC9 77 aa13.29□□□□□ -0.28
AC003087.1-201ENST00000412828 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
AC003087.1-201ENST00000412828 AK7Q96M32 723 aa13.29□□□□□ -0.28
AC003087.1-201ENST00000412828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.28□□□□□ -0.28
AC003087.1-201ENST00000412828 PHF14O94880 888 aa13.28□□□□□ -0.28
AC003087.1-201ENST00000412828 MMP10P09238 476 aa13.28□□□□□ -0.28
AC003087.1-201ENST00000412828 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
AC003087.1-201ENST00000412828 SSFA2P28290 1259 aa13.27□□□□□ -0.29
AC003087.1-201ENST00000412828 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
AC003087.1-201ENST00000412828 PIM2Q9P1W9 311 aa13.27□□□□□ -0.29
AC003087.1-201ENST00000412828 KCNA3P22001 575 aa13.26□□□□□ -0.29
AC003087.1-201ENST00000412828 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
AC003087.1-201ENST00000412828 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 POTECB2RU33 542 aa13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 SOX12O15370 315 aa13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 MCOLN1Q9GZU1 580 aa13.25□□□□□ -0.29
AC003087.1-201ENST00000412828 TMEM88BA6NKF7 163 aa13.24□□□□□ -0.29
AC003087.1-201ENST00000412828 DALRD3Q5D0E6 543 aaKnown RBP13.24□□□□□ -0.29
AC003087.1-201ENST00000412828 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
AC003087.1-201ENST00000412828 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
AC003087.1-201ENST00000412828 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
AC003087.1-201ENST00000412828 BRCA1P38398 1863 aaKnown RBP13.23□□□□□ -0.29
AC003087.1-201ENST00000412828 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
AC003087.1-201ENST00000412828 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
AC003087.1-201ENST00000412828 ADRA2BP18089 450 aa13.22□□□□□ -0.29
AC003087.1-201ENST00000412828 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
AC003087.1-201ENST00000412828 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
AC003087.1-201ENST00000412828 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
AC003087.1-201ENST00000412828 LMNB1P20700 586 aa13.21□□□□□ -0.29
AC003087.1-201ENST00000412828 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
AC003087.1-201ENST00000412828 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
AC003087.1-201ENST00000412828 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 NFAT5O94916 1531 aa13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 SBF1O95248 1867 aa13.2□□□□□ -0.3
AC003087.1-201ENST00000412828 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
AC003087.1-201ENST00000412828 DLL1O00548 723 aa13.19□□□□□ -0.3
AC003087.1-201ENST00000412828 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
AC003087.1-201ENST00000412828 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
AC003087.1-201ENST00000412828 RASSF7Q02833 373 aa13.18□□□□□ -0.3
AC003087.1-201ENST00000412828 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
AC003087.1-201ENST00000412828 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
AC003087.1-201ENST00000412828 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
AC003087.1-201ENST00000412828 TMF1P82094 1093 aa13.16□□□□□ -0.3
AC003087.1-201ENST00000412828 DGKZQ13574 1117 aa13.16□□□□□ -0.3
AC003087.1-201ENST00000412828 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms