RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
CLTCL1-201ENST00000412649 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.24
CLTCL1-201ENST00000412649 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
CLTCL1-201ENST00000412649 NSD2O96028 1365 aa16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 CLIP2Q9UDT6 1046 aa16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 CYP46A1Q9Y6A2 500 aa16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 STX6O43752 255 aa16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.23
CLTCL1-201ENST00000412649 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 AK7Q96M32 723 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 PKP1Q13835 747 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
CLTCL1-201ENST00000412649 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 PSMA5P28066 241 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 GABPB1Q06547 395 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 ZSCAN31Q96LW9 406 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 TSPYL4Q9UJ04 414 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 CCDC186Q7Z3E2 898 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 UBTFL1P0CB47 393 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 NOL10Q9BSC4 688 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-201ENST00000412649 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 CCP110O43303 1012 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 SURF6O75683 361 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 SDF4Q9BRK5 362 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 SMC2O95347 1197 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 IFIT2P09913 472 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 TMCO3Q6UWJ1 677 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 CCDC83Q8IWF9 413 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 CKAP2LQ8IYA6 745 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 DCTPP1Q9H773 170 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
CLTCL1-201ENST00000412649 UBXN4Q92575 508 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 NEMFO60524 1076 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 ANAPC15P60006 121 aa16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-201ENST00000412649 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 MAP4K4O95819 1239 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 PTGS1P23219 599 aa16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 GTF2F1P35269 517 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 CASTP20810 708 aaKnown RBP16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
CLTCL1-201ENST00000412649 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
CLTCL1-201ENST00000412649 HSP90B2PQ58FF3 399 aa16.46■□□□□ 0.23
CLTCL1-201ENST00000412649 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.23
CLTCL1-201ENST00000412649 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
CLTCL1-201ENST00000412649 TRMT1Q9NXH9 659 aaKnown RBP16.46■□□□□ 0.23
CLTCL1-201ENST00000412649 SCAND2PQ9GZW5 306 aaPredicted RBP16.46■□□□□ 0.22
CLTCL1-201ENST00000412649 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 FOSBP53539 338 aa16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 CHMP4CQ96CF2 233 aa16.45■□□□□ 0.22
CLTCL1-201ENST00000412649 ZNF165P49910 485 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 MBIPQ9NS73 344 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 KDM5DQ9BY66 1539 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 POLR3GO15318 223 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 PDE1AP54750 535 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 CWC27Q6UX04 472 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 CEP57L1Q8IYX8 460 aa16.44■□□□□ 0.22
CLTCL1-201ENST00000412649 BRD1O95696 1058 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 ACBD3Q9H3P7 528 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 KIAA0556O60303 1618 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 CLEC17AQ6ZS10 378 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
CLTCL1-201ENST00000412649 ANKRD1Q15327 319 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms