RNA–Protein interactions for RNA: ENST00000412164.1

HMGN2P35-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 35, humanhuman

BASIC

Gene HMGN2P35, Length 270 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P35-201ENST00000412164 TNPO1Q92973 898 aaKnown RBP3.25□□□□□ -1.89
HMGN2P35-201ENST00000412164 ZNF396Q96N95 335 aaPredicted RBP3.25□□□□□ -1.89
HMGN2P35-201ENST00000412164 METTL14Q9HCE5 456 aaKnown RBP3.25□□□□□ -1.89
HMGN2P35-201ENST00000412164 CHCHD3Q9NX63 227 aaKnown RBP3.25□□□□□ -1.89
HMGN2P35-201ENST00000412164 TBC1D2BQ9UPU7 963 aa3.25□□□□□ -1.89
HMGN2P35-201ENST00000412164 IPO5O00410 1097 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 CBFA2T2O43439 604 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 TIMM44O43615 452 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 SH3BP5O60239 455 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 RAB11FIP3O75154 756 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 EIF3JO75822 258 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 STK10O94804 968 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 SLFN14P0C7P3 912 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 ALDH1B1P30837 517 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 CASQ1P31415 396 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 GTF2F1P35269 517 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 MRE11P49959 708 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 LSM11P83369 360 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 IRF5Q13568 498 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 TSGA10IPQ3SY00 556 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 JAKMIP3Q5VZ66 844 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 KLHL10Q6JEL2 608 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 ZNF662Q6ZS27 426 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 ANKRD13DQ6ZTN6 518 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 ANKRD13BQ86YJ7 626 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 MICALL1Q8N3F8 863 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 SAMD3Q8N6K7 520 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 TATDN2Q93075 761 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 RNF25Q96BH1 459 aaPredicted RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 AGBL1Q96MI9 1066 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 POLR3CQ9BUI4 534 aaPredicted RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 RETREG1Q9H6L5 497 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 PUF60Q9UHX1 559 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 TPX2Q9ULW0 747 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 PDZRN3Q9UPQ7 1066 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 COMMD10Q9Y6G5 202 aa3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 EIF4G1Q04637 1599 aaKnown RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 IBTKQ9P2D0 1353 aaPredicted RBP3.24□□□□□ -1.89
HMGN2P35-201ENST00000412164 H0YHG0 523 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 PES1O00541 588 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 RGL2O15211 777 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 CCP110O43303 1012 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 FRAT2O75474 233 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 ECEL1O95672 775 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 SETSIPP0DME0 302 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 HSPA5P11021 654 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 VDRP11473 427 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 NAP1L1P55209 391 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 IRX1P78414 480 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 HMGN5P82970 282 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 SARNPP82979 210 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 KCNA1Q09470 495 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 CCDC15Q0P6D6 951 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 BMS1Q14692 1282 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 ATP2B3Q16720 1220 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 HS1BP3Q53T59 392 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 POTEEQ6S8J3 1075 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 SASS6Q6UVJ0 657 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 ZNF771Q7L3S4 317 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 CCDC91Q7Z6B0 441 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 ZSCAN30Q86W11 494 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 IQCF2Q8IXL9 164 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 PMM1Q92871 262 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 FEZ1Q99689 392 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 SENP7Q9BQF6 1050 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 TMX4Q9H1E5 349 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 GNL3LQ9NVN8 582 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 ETAA1Q9NY74 926 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 UTP6Q9NYH9 597 aaKnown RBP3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 POGKQ9P215 609 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 RSPH14Q9UHP6 348 aa3.23□□□□□ -1.89
HMGN2P35-201ENST00000412164 SPAG9O60271 1321 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 SCAPERQ9BY12 1400 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 RBM47A0AV96 593 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 BICDL2A1A5D9 508 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 KINO60870 393 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 CAND2O75155 1236 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 NAT2P11245 290 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 MS4A1P11836 297 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 ATP6V1AP38606 617 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 CBX1P83916 185 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 ADCY2Q08462 1091 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 CHAF1AQ13111 956 aaPredicted RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 PPP2R5AQ15172 486 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 MFSD4BQ5TF39 518 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 LARP1BQ659C4 914 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 KCNV1Q6PIU1 500 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 TRIM74Q86UV6 250 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 TRIM73Q86UV7 250 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 NCAPG2Q86XI2 1143 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 SUGP1Q8IWZ8 645 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 ELOA2Q8IYF1 753 aaPredicted RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 SMCR8Q8TEV9 937 aaPredicted RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 RSPH1Q8WYR4 309 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 PPP1R9BQ96SB3 815 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 TACO1Q9BSH4 297 aaKnown RBP3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 PANK2Q9BZ23 570 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 RASSF4Q9H2L5 321 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 RMI1Q9H9A7 625 aa3.22□□□□□ -1.89
HMGN2P35-201ENST00000412164 FBXO9Q9UK97 447 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms