RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 IKQ13123 557 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-203ENST00000412145 LRRC27Q9C0I9 530 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 A6NNZ2 444 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 PAFAH1B1P43034 410 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 TUBB8Q3ZCM7 444 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 KLHL34Q8N239 644 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 TTC21AQ8NDW8 1320 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 SCAND2PQ9GZW5 306 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-203ENST00000412145 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC69A6NI79 296 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 CENPHQ9H3R5 247 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 PANK3Q9H999 370 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 RIPK4P57078 832 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
PTPN3-203ENST00000412145 DAPK1P53355 1430 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 UQCRHP07919 91 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 ME1P48163 572 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 IFFO1Q0D2I5 559 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 STXBP4Q6ZWJ1 553 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 NUP62CLQ9H1M0 184 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 FSD2A1L4K1 749 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
PTPN3-203ENST00000412145 AIMP1Q12904 312 aaKnown RBP8.61□□□□□ -1.03
PTPN3-203ENST00000412145 WDHD1O75717 1129 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-203ENST00000412145 ANKS4BQ8N8V4 417 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 TANGO6Q9C0B7 1094 aa8.61□□□□□ -1.03
PTPN3-203ENST00000412145 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
PTPN3-203ENST00000412145 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
PTPN3-203ENST00000412145 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-203ENST00000412145 MAP3K11Q16584 847 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC110Q8TBZ0 833 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC6Q16204 474 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 TSPYL4Q9UJ04 414 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-203ENST00000412145 GNAI2P04899 355 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 USP37Q86T82 979 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 GRPEL1Q9HAV7 217 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-203ENST00000412145 ANO10Q9NW15 660 aa8.6□□□□□ -1.03
PTPN3-203ENST00000412145 HSPA4P34932 840 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 PTPN14Q15678 1187 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 KIAA1524Q8TCG1 905 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 SWAP70Q9UH65 585 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 PAXBP1Q9Y5B6 917 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 CKAP4Q07065 602 aaKnown RBP8.59□□□□□ -1.03
PTPN3-203ENST00000412145 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 PIBF1Q8WXW3 757 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
PTPN3-203ENST00000412145 DHX37Q8IY37 1157 aaKnown RBP8.59□□□□□ -1.03
PTPN3-203ENST00000412145 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 WIZO95785 1651 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 MINK1Q8N4C8 1332 aaPredicted RBP8.59□□□□□ -1.03
PTPN3-203ENST00000412145 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
PTPN3-203ENST00000412145 YEATS4O95619 227 aa8.59□□□□□ -1.04
PTPN3-203ENST00000412145 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.04
PTPN3-203ENST00000412145 ESPNB1AK53 854 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 KIF4AO95239 1232 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 CASQ1P31415 396 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 SRRTQ9BXP5 876 aaKnown RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 SSX2IPQ9Y2D8 614 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 FOXD4L6Q3SYB3 417 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 FOXD4L3Q6VB84 417 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 GSTTP1A0A1W2PQM5 241 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 PODXL2Q9NZ53 605 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 IKBKGQ9Y6K9 419 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 TOP2AP11388 1531 aaKnown RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 GPRASP1Q5JY77 1395 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 ZWINTO95229 277 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 MAP4K4O95819 1239 aaPredicted RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 NEK4P51957 841 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 KIF3CO14782 793 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 TRAF1Q13077 416 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 NEUROD6Q96NK8 337 aa8.58□□□□□ -1.04
PTPN3-203ENST00000412145 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 SLU7O95391 586 aaKnown RBP8.58□□□□□ -1.04
PTPN3-203ENST00000412145 EXOC6Q8TAG9 804 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC12Q8WUD4 166 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-203ENST00000412145 RASAL2Q9UJF2 1139 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 ANAPC4Q9UJX5 808 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-203ENST00000412145 VIMP08670 466 aaKnown RBP8.57□□□□□ -1.04
PTPN3-203ENST00000412145 ACTN2P35609 894 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 TMEM266Q2M3C6 531 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 AMPD3Q01432 767 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 CEP83Q9Y592 693 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-203ENST00000412145 CCDC77Q9BR77 488 aa8.57□□□□□ -1.04
PTPN3-203ENST00000412145 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms