RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 ZNF521Q96K83 1311 aa26.65■■□□□ 1.86
PTPA-208ENST00000411917 HTATSF1O43719 755 aaKnown RBP26.64■■□□□ 1.86
PTPA-208ENST00000411917 TATP17735 454 aaPredicted RBP26.64■■□□□ 1.86
PTPA-208ENST00000411917 LMOD3Q0VAK6 560 aa26.64■■□□□ 1.86
PTPA-208ENST00000411917 PLEKHO1Q53GL0 409 aaPredicted RBP26.64■■□□□ 1.86
PTPA-208ENST00000411917 USP21Q9UK80 565 aa26.64■■□□□ 1.86
PTPA-208ENST00000411917 MEGF6O75095 1541 aa26.64■■□□□ 1.85
PTPA-208ENST00000411917 PKD1L3Q7Z443 1732 aa26.63■■□□□ 1.85
PTPA-208ENST00000411917 IL2RBP14784 551 aa26.63■■□□□ 1.85
PTPA-208ENST00000411917 ATRNO75882 1429 aa26.63■■□□□ 1.85
PTPA-208ENST00000411917 AFF2P51816 1311 aa26.62■■□□□ 1.85
PTPA-208ENST00000411917 PDE3BQ13370 1112 aa26.6■■□□□ 1.85
PTPA-208ENST00000411917 SPG7Q9UQ90 795 aa26.6■■□□□ 1.85
PTPA-208ENST00000411917 MTHFSDQ2M296 383 aaKnown RBP26.59■■□□□ 1.85
PTPA-208ENST00000411917 TRPC5Q9UL62 973 aaPredicted RBP26.59■■□□□ 1.85
PTPA-208ENST00000411917 WNK3Q9BYP7 1800 aa26.58■■□□□ 1.85
PTPA-208ENST00000411917 RIPK4P57078 832 aa26.58■■□□□ 1.85
PTPA-208ENST00000411917 WDR63Q8IWG1 891 aa26.57■■□□□ 1.84
PTPA-208ENST00000411917 AKAP4Q5JQC9 854 aa26.56■■□□□ 1.84
PTPA-208ENST00000411917 WWC1Q8IX03 1113 aa26.56■■□□□ 1.84
PTPA-208ENST00000411917 TRIM35Q9UPQ4 493 aa26.56■■□□□ 1.84
PTPA-208ENST00000411917 MAP3K5Q99683 1374 aa26.56■■□□□ 1.84
PTPA-208ENST00000411917 ZNF772Q68DY9 489 aaPredicted RBP26.55■■□□□ 1.84
PTPA-208ENST00000411917 IL16Q14005 1332 aa26.55■■□□□ 1.84
PTPA-208ENST00000411917 CALD1Q05682 793 aaKnown RBP26.54■■□□□ 1.84
PTPA-208ENST00000411917 YTHDC1Q96MU7 727 aaKnown RBP26.54■■□□□ 1.84
PTPA-208ENST00000411917 PCDH11XQ9BZA7 1347 aa26.54■■□□□ 1.84
PTPA-208ENST00000411917 PCDH11YQ9BZA8 1340 aa26.54■■□□□ 1.84
PTPA-208ENST00000411917 GNAT3A8MTJ3 354 aa26.53■■□□□ 1.84
PTPA-208ENST00000411917 TNS2Q63HR2 1409 aa26.53■■□□□ 1.84
PTPA-208ENST00000411917 ADAMTS7Q9UKP4 1686 aa26.53■■□□□ 1.84
PTPA-208ENST00000411917 ONECUT3O60422 494 aaPredicted RBP26.52■■□□□ 1.84
PTPA-208ENST00000411917 HSP90AB1P08238 724 aaKnown RBP26.52■■□□□ 1.84
PTPA-208ENST00000411917 ZCRB1Q8TBF4 217 aaKnown RBP26.52■■□□□ 1.84
PTPA-208ENST00000411917 GJD4Q96KN9 370 aaPredicted RBP26.52■■□□□ 1.84
PTPA-208ENST00000411917 CEMIPQ8WUJ3 1361 aa26.51■■□□□ 1.83
PTPA-208ENST00000411917 ZNF530Q6P9A1 599 aaPredicted RBP26.51■■□□□ 1.83
PTPA-208ENST00000411917 IFNL2Q8IZJ0 200 aa26.51■■□□□ 1.83
PTPA-208ENST00000411917 NKX1-1Q15270 411 aaPredicted RBP26.5■■□□□ 1.83
PTPA-208ENST00000411917 C1orf141Q5JVX7 400 aa26.5■■□□□ 1.83
PTPA-208ENST00000411917 RRP7AQ9Y3A4 280 aaKnown RBP26.5■■□□□ 1.83
PTPA-208ENST00000411917 GLI3P10071 1580 aa26.5■■□□□ 1.83
PTPA-208ENST00000411917 THSD7AQ9UPZ6 1657 aa26.49■■□□□ 1.83
PTPA-208ENST00000411917 LRRC37A3O60309 1634 aa26.48■■□□□ 1.83
PTPA-208ENST00000411917 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
PTPA-208ENST00000411917 PHKG2P15735 406 aa26.48■■□□□ 1.83
PTPA-208ENST00000411917 GOLGA2Q08379 1002 aa26.48■■□□□ 1.83
PTPA-208ENST00000411917 RTF1Q92541 710 aaKnown RBP26.48■■□□□ 1.83
PTPA-208ENST00000411917 USP35Q9P2H5 1018 aa26.48■■□□□ 1.83
PTPA-208ENST00000411917 NEUROD2Q15784 382 aa26.47■■□□□ 1.83
PTPA-208ENST00000411917 CCDC9Q9Y3X0 531 aaKnown RBP26.47■■□□□ 1.83
PTPA-208ENST00000411917 SHANK3Q9BYB0 1731 aa26.46■■□□□ 1.83
PTPA-208ENST00000411917 E9PSI1 815 aa26.46■■□□□ 1.83
PTPA-208ENST00000411917 CYP27B1O15528 508 aa26.46■■□□□ 1.83
PTPA-208ENST00000411917 BABAM1Q9NWV8 329 aa26.46■■□□□ 1.83
PTPA-208ENST00000411917 EXOC5O00471 708 aa26.45■■□□□ 1.82
PTPA-208ENST00000411917 DCAF5Q96JK2 942 aa26.45■■□□□ 1.82
PTPA-208ENST00000411917 QTRT2Q9H974 415 aaKnown RBP26.45■■□□□ 1.82
PTPA-208ENST00000411917 TRMT2AQ8IZ69 625 aaKnown RBP26.44■■□□□ 1.82
PTPA-208ENST00000411917 MRC1P22897 1456 aa26.43■■□□□ 1.82
PTPA-208ENST00000411917 DDB1Q16531 1140 aa26.42■■□□□ 1.82
PTPA-208ENST00000411917 IFT57Q9NWB7 429 aa26.42■■□□□ 1.82
PTPA-208ENST00000411917 BCL9O00512 1426 aa26.41■■□□□ 1.82
PTPA-208ENST00000411917 ZNF853P0CG23 659 aa26.41■■□□□ 1.82
PTPA-208ENST00000411917 SLFN5Q08AF3 891 aa26.41■■□□□ 1.82
PTPA-208ENST00000411917 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
PTPA-208ENST00000411917 SALL2Q9Y467 1007 aaPredicted RBP26.41■■□□□ 1.82
PTPA-208ENST00000411917 RBM6P78332 1123 aaKnown RBP26.4■■□□□ 1.82
PTPA-208ENST00000411917 CFAP44Q96MT7 982 aa26.4■■□□□ 1.82
PTPA-208ENST00000411917 KDM6AO15550 1401 aaPredicted RBP26.39■■□□□ 1.82
PTPA-208ENST00000411917 RNMTO43148 476 aaKnown RBP26.39■■□□□ 1.82
PTPA-208ENST00000411917 GNAI1P63096 354 aa26.39■■□□□ 1.82
PTPA-208ENST00000411917 FAM98CQ17RN3 349 aaKnown RBP26.39■■□□□ 1.82
PTPA-208ENST00000411917 MYH16Q9H6N6 1097 aa26.39■■□□□ 1.82
PTPA-208ENST00000411917 ERVV-2B6SEH9 535 aa26.37■■□□□ 1.81
PTPA-208ENST00000411917 MCM10Q7L590 875 aa26.37■■□□□ 1.81
PTPA-208ENST00000411917 ILDR1Q86SU0 546 aaPredicted RBP26.37■■□□□ 1.81
PTPA-208ENST00000411917 SCN11AQ9UI33 1791 aa26.36■■□□□ 1.81
PTPA-208ENST00000411917 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
PTPA-208ENST00000411917 DUSP27Q5VZP5 1158 aa26.35■■□□□ 1.81
PTPA-208ENST00000411917 CHL1O00533 1208 aa26.34■■□□□ 1.81
PTPA-208ENST00000411917 DCTN1Q14203 1278 aa26.33■■□□□ 1.81
PTPA-208ENST00000411917 TAF7Q15545 349 aaPredicted RBP26.33■■□□□ 1.81
PTPA-208ENST00000411917 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
PTPA-208ENST00000411917 RGS17Q9UGC6 210 aaPredicted RBP26.33■■□□□ 1.81
PTPA-208ENST00000411917 SENP3-EIF4A1A0A087X0R7 540 aa26.32■■□□□ 1.8
PTPA-208ENST00000411917 SLC52A2Q9HAB3 445 aa26.32■■□□□ 1.8
PTPA-208ENST00000411917 LGR6Q9HBX8 967 aa26.32■■□□□ 1.8
PTPA-208ENST00000411917 TEFQ10587 303 aa26.31■■□□□ 1.8
PTPA-208ENST00000411917 DDX54Q8TDD1 881 aaKnown RBP26.31■■□□□ 1.8
PTPA-208ENST00000411917 CDCA7LQ96GN5 454 aa26.31■■□□□ 1.8
PTPA-208ENST00000411917 THUMPD2Q9BTF0 503 aaKnown RBP26.31■■□□□ 1.8
PTPA-208ENST00000411917 SPINK5Q9NQ38 1064 aaPredicted RBP26.31■■□□□ 1.8
PTPA-208ENST00000411917 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
PTPA-208ENST00000411917 CT47B1P0C2W7 299 aaPredicted RBP26.3■■□□□ 1.8
PTPA-208ENST00000411917 SEPT12Q8IYM1 358 aa26.29■■□□□ 1.8
PTPA-208ENST00000411917 MARCH10Q8NA82 808 aaPredicted RBP26.29■■□□□ 1.8
PTPA-208ENST00000411917 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
PTPA-208ENST00000411917 RXRBP28702 533 aa26.28■■□□□ 1.8
PTPA-208ENST00000411917 SOS1Q07889 1333 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms