RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 IGF1RP08069 1367 aa7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 GPR25O00155 361 aa7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 NR6A1Q15406 480 aa7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 ADAM32Q8TC27 787 aa7.08□□□□□ -1.28
RNU2-39P-201ENST00000410604 BCRP11274 1271 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 RHOQP17081 205 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 RAB15P59190 212 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 PTK2Q05397 1052 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 NBPF20Q3BBV1 942 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 PRICKLE2Q7Z3G6 844 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 TRIM22Q8IYM9 498 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 GMCL1Q96IK5 515 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 GOPCQ9HD26 462 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 POLR3EQ9NVU0 708 aa7.07□□□□□ -1.28
RNU2-39P-201ENST00000410604 ERVH48-1M5A8F1 160 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 DBN1Q16643 649 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 PODNQ7Z5L7 613 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 NEDD1Q8NHV4 660 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 ACDQ96AP0 544 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 RSPH6AQ9H0K4 717 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
RNU2-39P-201ENST00000410604 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
RNU2-39P-201ENST00000410604 SH3D19Q5HYK7 790 aa7.05□□□□□ -1.28
RNU2-39P-201ENST00000410604 GALNT6Q8NCL4 622 aa7.05□□□□□ -1.28
RNU2-39P-201ENST00000410604 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
RNU2-39P-201ENST00000410604 SKIV2LQ15477 1246 aaKnown RBP7.04□□□□□ -1.28
RNU2-39P-201ENST00000410604 FBXO31Q5XUX0 539 aaPredicted RBP7.04□□□□□ -1.28
RNU2-39P-201ENST00000410604 ESPNB1AK53 854 aa7.03□□□□□ -1.28
RNU2-39P-201ENST00000410604 FOXR1Q6PIV2 292 aa7.03□□□□□ -1.28
RNU2-39P-201ENST00000410604 GTPBP3Q969Y2 492 aaKnown RBP7.03□□□□□ -1.28
RNU2-39P-201ENST00000410604 K7ELQ4 463 aaPredicted RBP7.02□□□□□ -1.29
RNU2-39P-201ENST00000410604 RIPOR1Q6ZS17 1223 aa7.02□□□□□ -1.29
RNU2-39P-201ENST00000410604 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
RNU2-39P-201ENST00000410604 LRRC4BQ9NT99 713 aa7.02□□□□□ -1.29
RNU2-39P-201ENST00000410604 DZIP3Q86Y13 1208 aaKnown RBP7.01□□□□□ -1.29
RNU2-39P-201ENST00000410604 EPS8L1Q8TE68 723 aa7.01□□□□□ -1.29
RNU2-39P-201ENST00000410604 KRBA1A5PL33 1030 aa7□□□□□ -1.29
RNU2-39P-201ENST00000410604 H7C1W4 665 aa7□□□□□ -1.29
RNU2-39P-201ENST00000410604 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
RNU2-39P-201ENST00000410604 PROCA1Q8NCQ7 364 aaPredicted RBP7□□□□□ -1.29
RNU2-39P-201ENST00000410604 PCMTD1Q96MG8 357 aaPredicted RBP7□□□□□ -1.29
RNU2-39P-201ENST00000410604 DYRK1BQ9Y463 629 aa7□□□□□ -1.29
RNU2-39P-201ENST00000410604 OIP5O43482 229 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 MX2P20592 715 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 GPC1P35052 558 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 BAG6P46379 1132 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 SNRPNP63162 240 aaKnown RBP6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 Q8N3U1 123 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 TRERF1Q96PN7 1200 aa6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU2-39P-201ENST00000410604 ATP5J2-PTCD1G3V325 749 aa6.98□□□□□ -1.29
RNU2-39P-201ENST00000410604 SEPT12Q8IYM1 358 aa6.98□□□□□ -1.29
RNU2-39P-201ENST00000410604 GAS2L1Q99501 681 aaPredicted RBP6.98□□□□□ -1.29
RNU2-39P-201ENST00000410604 MEN1O00255 615 aa6.97□□□□□ -1.29
RNU2-39P-201ENST00000410604 POU4F2Q12837 409 aa6.97□□□□□ -1.29
RNU2-39P-201ENST00000410604 A0A1W2PRU2 124 aa6.96□□□□□ -1.3
RNU2-39P-201ENST00000410604 OXCT2Q9BYC2 517 aaPredicted RBP6.96□□□□□ -1.3
RNU2-39P-201ENST00000410604 HMX1Q9NP08 348 aaPredicted RBP6.96□□□□□ -1.3
RNU2-39P-201ENST00000410604 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
RNU2-39P-201ENST00000410604 AP1G2O75843 785 aa6.95□□□□□ -1.3
RNU2-39P-201ENST00000410604 FURINP09958 794 aa6.95□□□□□ -1.3
RNU2-39P-201ENST00000410604 COL8A1P27658 744 aa6.95□□□□□ -1.3
RNU2-39P-201ENST00000410604 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 C1orf229Q6ZS94 237 aaPredicted RBP6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 NBPF15Q8N660 670 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 TRIM52Q96A61 297 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 NUCKS1Q9H1E3 243 aaKnown RBP6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 MKL2Q9ULH7 1088 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 GTF3C3Q9Y5Q9 886 aa6.94□□□□□ -1.3
RNU2-39P-201ENST00000410604 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 GIGYF1O75420 1035 aaPredicted RBP6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 THBS1P07996 1170 aa6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 MAP2K3P46734 347 aa6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 ALYREFQ86V81 257 aaKnown RBP6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 PSMG3-AS1Q96PY0 264 aa6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 ATP1B4Q9UN42 357 aaPredicted RBP6.93□□□□□ -1.3
RNU2-39P-201ENST00000410604 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
RNU2-39P-201ENST00000410604 ERVK-9P63128 1117 aa6.92□□□□□ -1.3
RNU2-39P-201ENST00000410604 WDR44Q5JSH3 913 aa6.92□□□□□ -1.3
RNU2-39P-201ENST00000410604 NLRP3Q96P20 1036 aa6.92□□□□□ -1.3
RNU2-39P-201ENST00000410604 F11P03951 625 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 CLN3Q13286 438 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 CC2D2BQ6DHV5 1058 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 KLRG1Q96E93 195 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 CFHR5Q9BXR6 569 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
RNU2-39P-201ENST00000410604 RFC5P40937 340 aa6.9□□□□□ -1.3
RNU2-39P-201ENST00000410604 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
RNU2-39P-201ENST00000410604 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
RNU2-39P-201ENST00000410604 WASLO00401 505 aaPredicted RBP6.89□□□□□ -1.31
RNU2-39P-201ENST00000410604 HOXB4P17483 251 aaPredicted RBP6.89□□□□□ -1.31
RNU2-39P-201ENST00000410604 TAS1R3Q7RTX0 852 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms